RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 RRHO14718 337 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 NDUFA2O43678 99 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 AMY1AP04745 511 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 CD99P14209 185 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 SCNM1Q9BWG6 230 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 HSPB8Q9UJY1 196 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 LINC00587B1AMM8 73 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 LGALS7P47929 136 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 GFRA1P56159 465 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 CENPWQ5EE01 88 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 REC114Q7Z4M0 266 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 TMEM186Q96B77 213 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 ATP5G3P48201 142 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 RAMP3O60896 148 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 OR4A47Q6IF82 309 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 FAM90A1Q86YD7 464 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 THADAQ6YHU6 1953 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 C5orf52A6NGY3 159 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 OR2J3O76001 311 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 CD55P08174 381 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 CBLN1P23435 193 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 ERVFRD-1P60508 538 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 COL5A1-AS1Q5SY13 56 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 ZNF581Q9P0T4 197 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 OR9G1Q8NH87 305 aa13.55□□□□□ -0.24
PTPRN2-201ENST00000389413 PCNTO95613 3336 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 E9PLN8 166 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 CDX4O14627 284 aaPredicted RBP13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 SRIP30626 198 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 NPIPB3Q92617 1050 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 C1orf147Q96MC9 270 aaPredicted RBP13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BKO60814 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BJP06899 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 SMIM17P0DL12 118 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BOP23527 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BBP33778 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BDP58876 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BCP62807 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST2H2BEQ16778 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BHQ93079 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BNQ99877 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 HIST1H2BMQ99879 126 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 KBTBD11-OT1A0A1B0GTJ5 212 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 SS18L1O75177 396 aaPredicted RBP13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 CEACAM1P13688 526 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 ASCL4Q6XD76 172 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
PTPRN2-201ENST00000389413 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 ORM1P02763 201 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 IGFBP2P18065 325 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 B3GALT5-AS1P59052 145 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 CCDC144NLQ6NUI1 221 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 WDR82Q6UXN9 313 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 OSR1Q8TAX0 266 aaPredicted RBP13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 SCO2A0A1W2PP80 73 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 BMPR1BO00238 502 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 CGAP01215 116 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 FAM201AQ5SY85 155 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 RBM14Q96PK6 669 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 VSIRQ9H7M9 311 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 IL36BQ9NZH7 164 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 PI4KAP42356 2102 aa13.53□□□□□ -0.24
PTPRN2-201ENST00000389413 COMPP49747 757 aaPredicted RBP13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 PMCHL1Q16048 86 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 C9orf106Q8NAJ2 232 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 TM4SF5O14894 197 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 YPEL1O60688 119 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 GOSR1O95249 250 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 SPATA45Q537H7 98 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 YPEL2Q96QA6 119 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 IFI27L2Q9H2X8 130 aa13.52□□□□□ -0.24
PTPRN2-201ENST00000389413 PRSS1P07477 247 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 Q0VFX4 171 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 Q6ZS49 121 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 GRAMD2BQ96HH9 432 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 J3QR89 54 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 MST1LQ2TV78 715 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 BPIFA4PQ86YQ2 179 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 TMEM242Q9NWH2 141 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.25
PTPRN2-201ENST00000389413 TMSB15BA0A087X1C1 80 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 CBY3A6NI87 242 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 BMPERQ8N8U9 685 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 TMEM171Q8WVE6 324 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 CBLN4Q9NTU7 201 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 SLC17A3O00476 420 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 HGFACQ04756 655 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 ACSF3Q4G176 576 aaPredicted RBP13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 ELOVL1Q9BW60 279 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 IGHV3-48P01763 117 aa13.51□□□□□ -0.25
PTPRN2-201ENST00000389413 C1QL4Q86Z23 238 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms