RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 DIMT1Q9UNQ2 313 aaKnown RBP7□□□□□ -1.29
IFT88-203ENST00000389373 TRBV6-7A0A0A0MS04 114 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 IRGMA1A4Y4 181 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 BPNT1O95861 308 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 MAS1LP35410 378 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 TAS2R43P59537 309 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 RPL30P62888 115 aaKnown RBP6.99□□□□□ -1.29
IFT88-203ENST00000389373 PLA2G7Q13093 441 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 ARFRP1Q13795 201 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 ACSM3Q53FZ2 586 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 LEMD1Q68G75 181 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 UBAC2Q8NBM4 344 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 VSTM2AQ8TAG5 236 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 TMEM167AQ8TBQ9 72 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 CMTM3Q96MX0 182 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 CABLES2Q9BTV7 478 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 SCRT1Q9BWW7 348 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 PLGRKTQ9HBL7 147 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 THYN1Q9P016 225 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 MRPS7Q9Y2R9 242 aaKnown RBP6.99□□□□□ -1.29
IFT88-203ENST00000389373 PKHD1P08F94 4074 aa6.99□□□□□ -1.29
IFT88-203ENST00000389373 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 IGHV3OR16-13A0A075B7E8 117 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 ELOA3CA0A087WX78 387 aaPredicted RBP6.98□□□□□ -1.29
IFT88-203ENST00000389373 IGHV3-74A0A0B4J1X5 117 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 NDUFA4O00483 81 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 FCGR3AP08637 254 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 PTBP1P26599 531 aaKnown RBP eCLIP6.98□□□□□ -1.29
IFT88-203ENST00000389373 RPL8P62917 257 aaKnown RBP6.98□□□□□ -1.29
IFT88-203ENST00000389373 C1orf134Q5TEV5 83 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 SLC25A24Q6NUK1 477 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 STHQ8IWL8 128 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 PUSL1Q8N0Z8 303 aaKnown RBP6.98□□□□□ -1.29
IFT88-203ENST00000389373 Q8N1X5 172 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 FAM89BQ8N5H3 189 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 ZNF485Q8NCK3 441 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 TCTEX1D2Q8WW35 142 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 GIMAP1Q8WWP7 306 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 RHPN1-AS1Q9BWJ2 59 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 VCXQ9H320 206 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 SMPXQ9UHP9 88 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 ETV7Q9Y603 341 aa6.98□□□□□ -1.29
IFT88-203ENST00000389373 A0A075B6Q4 140 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 CGB1A6NKQ9 187 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 C15orf61A6NNL5 157 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 FOXI3A8MTJ6 420 aaPredicted RBP6.97□□□□□ -1.29
IFT88-203ENST00000389373 K7EMT4 169 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 DNASE2O00115 360 aaPredicted RBP6.97□□□□□ -1.29
IFT88-203ENST00000389373 CHEK1O14757 476 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 YIF1AO95070 293 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 AMBPP02760 352 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 MIFP14174 115 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 HLA-GP17693 338 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 DEFB131AP59861 70 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 RCN1Q15293 331 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 KLK9Q2XQG4 91 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 PLAC9Q5JTB6 97 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 Q6ZRM9 215 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 H1FOOQ8IZA3 346 aaPredicted RBP6.97□□□□□ -1.29
IFT88-203ENST00000389373 PACRGLQ8N7B6 248 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 TMEM116Q8NCL8 245 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 ZNF555Q8NEP9 628 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 OR56B1Q8NGI3 324 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 OR4S2Q8NH73 311 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 HRASLSQ9HDD0 168 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 SMPD3Q9NY59 655 aaPredicted RBP6.97□□□□□ -1.29
IFT88-203ENST00000389373 KLK9Q9UKQ9 250 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 SPATA2Q9UM82 520 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
IFT88-203ENST00000389373 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 MYL12BO14950 172 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 CYB5BO43169 146 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 HRASP01112 189 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 CD36P16671 472 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 CLDN12P56749 244 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 RPL11P62913 178 aaKnown RBP6.96□□□□□ -1.3
IFT88-203ENST00000389373 TNP2Q05952 138 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 ST3GAL4Q11206 333 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 C12orf74Q32Q52 190 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 HSD17B12Q53GQ0 312 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 Q56UQ5 140 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 Q6ZR54 194 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 PHYHIPQ92561 330 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 BSCL2Q96G97 398 aaPredicted RBP6.96□□□□□ -1.3
IFT88-203ENST00000389373 CLEC5AQ9NY25 188 aa6.96□□□□□ -1.3
IFT88-203ENST00000389373 RBMX2Q9Y388 322 aaKnown RBP6.96□□□□□ -1.3
IFT88-203ENST00000389373 EFCAB10A6NFE3 127 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 C15orf62A8K5M9 175 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 DENRO43583 198 aaKnown RBP6.95□□□□□ -1.3
IFT88-203ENST00000389373 CD1AP06126 327 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 CDK1P06493 297 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 NFYAP23511 347 aaPredicted RBP6.95□□□□□ -1.3
IFT88-203ENST00000389373 NPY1RP25929 384 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 TALDO1P37837 337 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 WNT4P56705 351 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 OR2B8PP59922 312 aa6.95□□□□□ -1.3
IFT88-203ENST00000389373 RAB11BQ15907 218 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms