RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 F8VVB4 439 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 F8VWA3 439 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 CRYGSP22914 178 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 COL4A6Q14031 1691 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 TRAV24A0A0B4J272 114 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 ZNF729A6NN14 1252 aaPredicted RBP14.46□□□□□ -0.09
SGCB-201ENST00000381431 MOSP00540 346 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 ACSF3Q4G176 576 aaPredicted RBP14.46□□□□□ -0.09
SGCB-201ENST00000381431 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 SSX8Q7RTT4 187 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 C9orf106Q8NAJ2 232 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 GP6Q9HCN6 339 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 GBF1Q92538 1859 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 IFNL4K9M1U5 179 aa14.46□□□□□ -0.1
SGCB-201ENST00000381431 GATA2P23769 480 aaPredicted RBP14.46□□□□□ -0.1
SGCB-201ENST00000381431 SRIP30626 198 aa14.46□□□□□ -0.1
SGCB-201ENST00000381431 WDYHV1Q96HA8 205 aa14.46□□□□□ -0.1
SGCB-201ENST00000381431 FCGR2BP31994 310 aaPredicted RBP14.45□□□□□ -0.1
SGCB-201ENST00000381431 TIMM23BQ5SRD1 257 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 CCDC144NLQ6NUI1 221 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 C19orf35Q6ZS72 473 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 LHFPL1Q86WI0 220 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 WFDC3Q8IUB2 231 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 ZCCHC24Q8N2G6 241 aaKnown RBP14.45□□□□□ -0.1
SGCB-201ENST00000381431 OR51G1Q8NGK1 321 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 OR4A5Q8NH83 315 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 IGKV1-27A0A075B6S5 117 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 IGHV2OR16-5A0A0B4J2B6 119 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 RNF224P0DH78 156 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 DDTP30046 118 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 PAFAH1B2P68402 229 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 HOXA4Q00056 320 aaPredicted RBP14.45□□□□□ -0.1
SGCB-201ENST00000381431 OR9G1Q8NH87 305 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 NABP1Q96AH0 204 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 FOXD3Q9UJU5 478 aaPredicted RBP14.45□□□□□ -0.1
SGCB-201ENST00000381431 CGB1A6NKQ9 187 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 SLC17A3O00476 420 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 ATP5G3P48201 142 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 PCSK4Q6UW60 755 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 RABAC1Q9UI14 185 aa14.45□□□□□ -0.1
SGCB-201ENST00000381431 PPIAL4CA0A0B4J2A2 164 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 OR2T8A6NH00 312 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 PPIAL4GP0DN37 164 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 WDR31Q8NA23 367 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 SFRP2Q96HF1 295 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 CBY1Q9Y3M2 126 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 EP400Q96L91 3159 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 J3QR89 54 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 FGF16O43320 207 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 IL6RP08887 468 aaPredicted RBP14.44□□□□□ -0.1
SGCB-201ENST00000381431 RELBQ01201 579 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 ID3Q02535 119 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 Q1RN00 199 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 TMEM177Q53S58 311 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 BPIFA4PQ86YQ2 179 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 C18orf12Q96KH6 178 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 CLDN16Q9Y5I7 305 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 PCNX2A6NKB5 2137 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 CGAP01215 116 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 HLA-DQA1P01909 254 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 OTX1P32242 354 aaPredicted RBP14.44□□□□□ -0.1
SGCB-201ENST00000381431 PPOXP50336 477 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 CENPWQ5EE01 88 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 CYP2G1PQ6ZSU1 146 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 PGLYRP4Q96LB8 373 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 TMEM208Q9BTX3 173 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 WFDC1Q9HC57 220 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 ZNF581Q9P0T4 197 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 ZNF883P0CG24 379 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 IGFBP2P18065 325 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 HSPB7Q9UBY9 170 aa14.44□□□□□ -0.1
SGCB-201ENST00000381431 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.43□□□□□ -0.1
SGCB-201ENST00000381431 RAMP3O60896 148 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 WISP1O95388 367 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 CLDND2Q8NHS1 167 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 RBM14Q96PK6 669 aaKnown RBP14.43□□□□□ -0.1
SGCB-201ENST00000381431 GATAD1Q8WUU5 269 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 SFXN3Q9BWM7 321 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 MYLKQ15746 1914 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 LINC01560Q8TB33 94 aa14.43□□□□□ -0.1
SGCB-201ENST00000381431 GCGP01275 180 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 MPZP25189 248 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 OR4A47Q6IF82 309 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 GGNQ86UU5 652 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 RFNGQ9Y644 331 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 SCGB1C2P0DMR2 95 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 ATOH7Q8N100 152 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 GTF3C1Q12789 2109 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 PRB3Q04118 309 aaPredicted RBP14.42□□□□□ -0.1
SGCB-201ENST00000381431 ZNF146Q15072 292 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 IMMP2LQ96T52 175 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 NEU1Q99519 415 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 CBLN4Q9NTU7 201 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 CD99P14209 185 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 S4R3C0 116 aa14.42□□□□□ -0.1
SGCB-201ENST00000381431 LOC102724200A0A096LPH7 203 aaPredicted RBP14.41□□□□□ -0.1
SGCB-201ENST00000381431 IFITM10A6NMD0 228 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 SPANXN1Q5VSR9 72 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 PNKDQ8N490 385 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 OR5R1Q8NH85 324 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms