RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 TCL1AP56279 114 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 ATP5IP56385 69 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-203ENST00000380877 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 ANAPC16Q96DE5 110 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 C18orf12Q96KH6 178 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 TXN2Q99757 166 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-203ENST00000380877 ABCA1O95477 2261 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 HSBP1O75506 76 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 ACAA1P09110 424 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 SAA2P0DJI9 122 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 RPEL1Q2QD12 228 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 RPRMLQ8N4K4 120 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 RBM14Q96PK6 669 aaKnown RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 MED13Q9UHV7 2174 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 MLNRO43193 412 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 TCF15Q12870 199 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 SRSF7Q16629 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 PUSL1Q8N0Z8 303 aaKnown RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 RNF138Q8WVD3 245 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 NPIPB3Q92617 1050 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 PLCE1Q9P212 2302 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 DKK1O94907 266 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 SUPT4H1P63272 117 aaKnown RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 FXYD3Q14802 87 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 PRR30Q53SZ7 412 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 FBXL15Q9H469 300 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 NOTCH2Q04721 2471 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 IGHV3OR16-10A0A075B7F0 116 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 CFPP27918 469 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 CAMPP49913 170 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 HLA-DRB5Q30154 266 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 FAM103A1Q9BTL3 118 aaKnown RBP10.23□□□□□ -0.77
GABPB1-203ENST00000380877 PITPNC1Q9UKF7 332 aa10.23□□□□□ -0.77
GABPB1-203ENST00000380877 RD3LP0DJH9 198 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 TXNDC17Q9BRA2 123 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 NDUFB4O95168 129 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 PF4V1P10720 104 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 LDLRAD3Q86YD5 345 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 FAM169BQ8N8A8 192 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 DNAJC4Q9NNZ3 241 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 PCDH15Q96QU1 1955 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 RAMP3O60896 148 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 COL8A1P27658 744 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
GABPB1-203ENST00000380877 ASCL4Q6XD76 172 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 PTPRQQ9UMZ3 2332 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 KIAA1324LA8MWY0 1029 aaPredicted RBP10.22□□□□□ -0.77
GABPB1-203ENST00000380877 WT1P19544 449 aaPredicted RBP10.22□□□□□ -0.77
GABPB1-203ENST00000380877 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
GABPB1-203ENST00000380877 DPRXA6NFQ7 191 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 RAB5AP20339 215 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 RSPO1Q2MKA7 263 aaPredicted RBP10.21□□□□□ -0.77
GABPB1-203ENST00000380877 CD177Q8N6Q3 437 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 LRTM2Q8N967 370 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 FAM168AQ92567 244 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 ANKHD1Q8IWZ3 2542 aaKnown RBP10.21□□□□□ -0.77
GABPB1-203ENST00000380877 NPIPB11E5RHQ5 1161 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 DUTP33316 252 aaKnown RBP10.21□□□□□ -0.77
GABPB1-203ENST00000380877 MFAP4P55083 255 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 PRB3Q04118 309 aaPredicted RBP10.21□□□□□ -0.77
GABPB1-203ENST00000380877 C5orf24Q7Z6I8 188 aa10.21□□□□□ -0.77
GABPB1-203ENST00000380877 C8orf88P0DMB2 117 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 EGR1P18146 543 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 CA7P43166 264 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 DEFA6Q01524 100 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 ID3Q02535 119 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 LY6EQ16553 131 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 RCC1LQ96I51 464 aaKnown RBP10.21□□□□□ -0.78
GABPB1-203ENST00000380877 NABP2Q9BQ15 211 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 NCOR2Q9Y618 2525 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 FAM74A7A6NL05 159 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 P01737 135 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 THBDP07204 575 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 ZNF672Q499Z4 452 aaPredicted RBP10.21□□□□□ -0.78
GABPB1-203ENST00000380877 ST6GALNAC3Q8NDV1 305 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 RARRES2Q99969 163 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 TMEM133Q9H2Q1 129 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.78
GABPB1-203ENST00000380877 RPUSD1Q9UJJ7 312 aaKnown RBP10.21□□□□□ -0.78
GABPB1-203ENST00000380877 NOTCH3Q9UM47 2321 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
GABPB1-203ENST00000380877 RNF212Q495C1 297 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 Q6P435 159 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 STPG3Q8N7X2 389 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 ZNF106Q9H2Y7 1883 aaKnown RBP10.2□□□□□ -0.78
GABPB1-203ENST00000380877 NHLH1Q02575 133 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 NUP37Q8NFH4 326 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 TNFSF13O75888 250 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 LOXL3P58215 753 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 LRRC75BQ2VPJ9 315 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 C1orf147Q96MC9 270 aaPredicted RBP10.2□□□□□ -0.78
GABPB1-203ENST00000380877 NPCDR1Q9BY65 106 aa10.2□□□□□ -0.78
GABPB1-203ENST00000380877 IGKV1D-33P01593 117 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms