RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PDCD6O75340 191 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 HOXC4P09017 264 aaPredicted RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 LTBRP36941 435 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 C2orf68Q2NKX9 166 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 GAPTQ8N292 157 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 RPS20P60866 119 aaKnown RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 PSG6Q00889 435 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 CLDND2Q8NHS1 167 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 WFDC12Q8WWY7 111 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 MRGPRFQ96AM1 343 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 IGKV3D-20A0A0C4DH25 116 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 A0A0J9YW62 118 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 FGF16O43320 207 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 LIFP15018 202 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 FAM89BQ8N5H3 189 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 CCL28Q9NRJ3 127 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 A0A087X0K7 114 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 PPP1R17O96001 155 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 CXCL10P02778 98 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 PSG9Q00887 426 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 C1QTNF4Q9BXJ3 329 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 PPYP01298 95 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 TPRP12270 2363 aaKnown RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 RP1L1Q8IWN7 2480 aaPredicted RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 CDK5RAP2Q96SN8 1893 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 C9JCJ5 164 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 IL11P20809 199 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 SUMO3P55854 103 aaPredicted RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 BCL6BQ8N143 479 aaPredicted RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 FRRS1LQ9P0K9 344 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 SIGLEC7Q9Y286 467 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 IZUMO1RA6ND01 250 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 FOXA3P55318 350 aaPredicted RBP9.23□□□□□ -0.93
CLCN4-202ENST00000380833 KNL1Q8NG31 2342 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 SOCS1O15524 211 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 CELA3AP09093 270 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 IGFBP2P18065 325 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 C10orf111Q8N326 155 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 C18orf15Q96N68 181 aa9.23□□□□□ -0.93
CLCN4-202ENST00000380833 NHSQ6T4R5 1651 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 CEACAM21Q3KPI0 293 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 PRDX2P32119 198 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 MRGPRX3Q96LB0 322 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 SSBP3Q9BWW4 388 aaPredicted RBP9.22□□□□□ -0.93
CLCN4-202ENST00000380833 LY6DQ14210 128 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 C8orf82Q6P1X6 216 aaPredicted RBP9.22□□□□□ -0.93
CLCN4-202ENST00000380833 MRPS18AQ9NVS2 196 aaKnown RBP9.22□□□□□ -0.93
CLCN4-202ENST00000380833 SSTR5P35346 364 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 RPL23P62829 140 aaKnown RBP9.22□□□□□ -0.93
CLCN4-202ENST00000380833 C3orf36Q3SXR2 165 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 KIR3DL3Q8N743 410 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 FBLIM1Q8WUP2 373 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 GPHA2Q96T91 129 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 DSPPQ9NZW4 1301 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 CACNA1CQ13936 2221 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 SPINT1O43278 529 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 ARL14EPLP0DKL9 152 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 PSG2P11465 335 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
CLCN4-202ENST00000380833 A0A0B4J2E0 115 aa9.21□□□□□ -0.93
CLCN4-202ENST00000380833 hCG_38984A0A1B0GV85 526 aa9.21□□□□□ -0.93
CLCN4-202ENST00000380833 A0A1B0GX12 115 aa9.21□□□□□ -0.93
CLCN4-202ENST00000380833 FAM53AQ6NSI3 398 aaPredicted RBP9.21□□□□□ -0.93
CLCN4-202ENST00000380833 ITLN1Q8WWA0 313 aa9.21□□□□□ -0.93
CLCN4-202ENST00000380833 CENPWQ5EE01 88 aa9.21□□□□□ -0.93
CLCN4-202ENST00000380833 GPR132Q9UNW8 380 aa9.21□□□□□ -0.93
CLCN4-202ENST00000380833 IGLV3-27P01718 113 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 MPZP25189 248 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 DRD3P35462 400 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 PCOLCEQ15113 449 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 ACTL10Q5JWF8 245 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 CD1AP06126 327 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 GPR35Q9HC97 309 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 NDUFA3O95167 84 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 OR2H2O95918 312 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 CA7P43166 264 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 CDCP2Q5VXM1 449 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 C16orf54Q6UWD8 224 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 ASCL5Q7RTU5 278 aa9.21□□□□□ -0.94
CLCN4-202ENST00000380833 A0A1W2PQF6 199 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 DPM2O94777 84 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 FAM106CPP0CH98 169 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 PEAR1Q5VY43 1037 aaPredicted RBP9.2□□□□□ -0.94
CLCN4-202ENST00000380833 NUP98P52948 1817 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 EFNB2P52799 333 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 DLX6P56179 175 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms