RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PLET1Q6UQ28 207 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 NR2C2APQ86WQ0 139 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 SLC38A6Q8IZM9 456 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 NRG4Q8WWG1 115 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 MARC2Q969Z3 335 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 UFC1Q9Y3C8 167 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 TRAV25A0A0B4J276 109 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 APOC4P55056 127 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 BRWD1-AS2P59051 145 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 EIF4EBP1Q13541 118 aaPredicted RBP17.23■□□□□ 0.35
U2AF1-202ENST00000380276 DEFB135Q30KP9 77 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 TIMM50Q3ZCQ8 353 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 LYG2Q86SG7 212 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 SPAG16Q8N0X2 631 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 OR2C3Q8N628 320 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 CNBD2Q96M20 576 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 CCL28Q9NRJ3 127 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 MRPL27Q9P0M9 148 aaKnown RBP17.23■□□□□ 0.35
U2AF1-202ENST00000380276 BLOC1S6Q9UL45 172 aa17.23■□□□□ 0.35
U2AF1-202ENST00000380276 SPRY2O43597 315 aa17.22■□□□□ 0.35
U2AF1-202ENST00000380276 OR4A5Q8NH83 315 aa17.22■□□□□ 0.35
U2AF1-202ENST00000380276 AIFM2Q9BRQ8 373 aa17.22■□□□□ 0.35
U2AF1-202ENST00000380276 BET1LQ9NYM9 111 aa17.22■□□□□ 0.35
U2AF1-202ENST00000380276 DAPK2Q9UIK4 370 aa17.22■□□□□ 0.35
U2AF1-202ENST00000380276 CGB1A6NKQ9 187 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 NOTOA8MTQ0 251 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 SSX5O60225 188 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 SCGNO76038 276 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 EWSR1Q01844 656 aaKnown RBP eCLIP17.21■□□□□ 0.35
U2AF1-202ENST00000380276 OR13F1Q8NGS4 319 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 COMMD5Q9GZQ3 224 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 THYN1Q9P016 225 aa17.21■□□□□ 0.35
U2AF1-202ENST00000380276 SULT1C2O00338 296 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 PTHLHP12272 177 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 RPA2P15927 270 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 FCGR2CP31995 323 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 BMI1P35226 326 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 OR2B8PP59922 312 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 CEMP1Q6PRD7 247 aaPredicted RBP17.2■□□□□ 0.34
U2AF1-202ENST00000380276 ZNF502Q8TBZ5 544 aa17.2■□□□□ 0.34
U2AF1-202ENST00000380276 FCER2P06734 321 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 GALP22466 123 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 FXYD4P59646 89 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 CATR1Q13166 79 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 BEST4Q8NFU0 473 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 LGALS14Q8TCE9 139 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 SPAG8Q99932 426 aaPredicted RBP17.19■□□□□ 0.34
U2AF1-202ENST00000380276 TP53TG1Q9Y2A0 90 aa17.19■□□□□ 0.34
U2AF1-202ENST00000380276 KLK5Q9Y337 293 aaPredicted RBP17.19■□□□□ 0.34
U2AF1-202ENST00000380276 RRP15Q9Y3B9 282 aaKnown RBP17.19■□□□□ 0.34
U2AF1-202ENST00000380276 TRAV3A0A0B4J244 114 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 CYB5BO43169 146 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 TGOLN2O43493 480 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 C8orf88P0DMB2 117 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 RPL35AP18077 110 aaKnown RBP17.18■□□□□ 0.34
U2AF1-202ENST00000380276 ELLP55199 621 aaPredicted RBP17.18■□□□□ 0.34
U2AF1-202ENST00000380276 TNFRSF9Q07011 255 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 KLK9Q2XQG4 91 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 STPG3Q8N7X2 389 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 DMBX1Q8NFW5 382 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 SLC5A7Q9GZV3 580 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 KLK9Q9UKQ9 250 aa17.18■□□□□ 0.34
U2AF1-202ENST00000380276 IGLC7A0M8Q6 106 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 OR2T8A6NH00 312 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 NQO2P16083 231 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 PSMB9P28065 219 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 TAS2R31P59538 309 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 LAMTOR1Q6IAA8 161 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 Q6ZWC4 215 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 WFDC3Q8IUB2 231 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 GVQW1Q8N7I0 195 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 OR51H1Q8NH63 302 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 C20orf24Q9BUV8 137 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 C5orf66Q9H5L9 145 aa17.17■□□□□ 0.34
U2AF1-202ENST00000380276 TXNL4BQ9NX01 149 aaKnown RBP17.17■□□□□ 0.34
U2AF1-202ENST00000380276 IGHV3-21A0A0B4J1V1 117 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 UPK2O00526 184 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 UBE2CO00762 179 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 HPRT1P00492 218 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 PPYP01298 95 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 PTBP1P26599 531 aaKnown RBP eCLIP17.16■□□□□ 0.34
U2AF1-202ENST00000380276 SLC25A24Q6NUK1 477 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 IZUMO2Q6UXV1 221 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 OR10W1Q8NGF6 305 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 TMEM190Q8WZ59 177 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 ZNF436Q9C0F3 470 aaPredicted RBP17.16■□□□□ 0.34
U2AF1-202ENST00000380276 VCX3BQ9H321 246 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 TMEM140Q9NV12 185 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 RHBDL2Q9NX52 303 aa17.16■□□□□ 0.34
U2AF1-202ENST00000380276 TRAV18A0A075B6X5 111 aa17.15■□□□□ 0.34
U2AF1-202ENST00000380276 AADACL3Q5VUY0 350 aa17.15■□□□□ 0.34
U2AF1-202ENST00000380276 TMEM17Q86X19 198 aa17.15■□□□□ 0.34
U2AF1-202ENST00000380276 TMEM217Q8N7C4 229 aa17.15■□□□□ 0.34
U2AF1-202ENST00000380276 ZBTB34Q8NCN2 500 aa17.15■□□□□ 0.34
U2AF1-202ENST00000380276 HINT2Q9BX68 163 aa17.15■□□□□ 0.34
U2AF1-202ENST00000380276 QTRT1Q9BXR0 403 aaKnown RBP17.15■□□□□ 0.34
U2AF1-202ENST00000380276 IGHV3OR16-8A0A075B7F1 116 aa17.14■□□□□ 0.33
U2AF1-202ENST00000380276 TSPAN4O14817 238 aa17.14■□□□□ 0.33
U2AF1-202ENST00000380276 RBFOX2O43251 390 aaKnown RBP eCLIP17.14■□□□□ 0.33
U2AF1-202ENST00000380276 ZNF207O43670 478 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms