RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SLC25A42Q86VD7 318 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 FAM219AQ8IW50 185 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 LFNGQ8NES3 379 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 OR5M8Q8NGP6 311 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 RBPMSQ93062 196 aaKnown RBP9.35□□□□□ -0.91
PCNA-201ENST00000379143 IL22RA2Q969J5 263 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 RRNAD1Q96FB5 475 aaKnown RBP9.35□□□□□ -0.91
PCNA-201ENST00000379143 FAM103A1Q9BTL3 118 aaKnown RBP9.35□□□□□ -0.91
PCNA-201ENST00000379143 COMMD5Q9GZQ3 224 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
PCNA-201ENST00000379143 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 TGP01266 2768 aa9.35□□□□□ -0.91
PCNA-201ENST00000379143 FAM240BA0A1B0GVZ2 78 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 A0A1W2PN81 502 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 G3V318 75 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 VAMP1P23763 118 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 PSMB8P28062 276 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 CHRNA7P36544 502 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 DEFA1P59665 94 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 DEFA3P59666 94 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 SUPT4H1P63272 117 aaKnown RBP9.34□□□□□ -0.91
PCNA-201ENST00000379143 SRSF4Q08170 494 aaKnown RBP9.34□□□□□ -0.91
PCNA-201ENST00000379143 CXorf66Q5JRM2 361 aaPredicted RBP9.34□□□□□ -0.91
PCNA-201ENST00000379143 THOC7Q6I9Y2 204 aaKnown RBP9.34□□□□□ -0.91
PCNA-201ENST00000379143 TMEM65Q6PI78 240 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 NDUFA11Q86Y39 141 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 C11orf44Q8N8P7 122 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 RNASE11Q8TAA1 199 aaKnown RBP9.34□□□□□ -0.91
PCNA-201ENST00000379143 TMEM56Q96MV1 263 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 TBC1D24Q9ULP9 559 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 TSSC4Q9Y5U2 329 aaPredicted RBP9.34□□□□□ -0.91
PCNA-201ENST00000379143 TMEM56-RWDD3S4R434 201 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
PCNA-201ENST00000379143 TRAV3A0A0B4J244 114 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 TCRBV4S1A1TA0A5B7 111 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 C15orf61A6NNL5 157 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 H3BUA1 57 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 M0QZ24 198 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 IGKV1-5P01602 117 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 TCRBP04435 133 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 TMEM187Q14656 261 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 C2orf68Q2NKX9 166 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 TMEM268Q5VZI3 342 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 HSD17B13Q7Z5P4 300 aaPredicted RBP9.33□□□□□ -0.92
PCNA-201ENST00000379143 LGI3Q8N145 548 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 OR4A16Q8NH70 328 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
PCNA-201ENST00000379143 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
PCNA-201ENST00000379143 C20orf85Q9H1P6 137 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 SLA2Q9H6Q3 261 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 ZNF257Q9Y2Q1 563 aa9.33□□□□□ -0.92
PCNA-201ENST00000379143 DUXBA0A1W2PPF3 345 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 RBMXL2O75526 392 aaKnown RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 BRI3O95415 125 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 SFT2D2O95562 160 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 RAB25P57735 213 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 OR2B8PP59922 312 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 IFITM3Q01628 133 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 PPP1R1AQ13522 171 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 TCTEX1D4Q5JR98 221 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 C10orf55Q5SWW7 151 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 SELENOHQ8IZQ5 122 aaKnown RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 OR1L8Q8NGR8 309 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 LHFPL5Q8TAF8 219 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 FAM110DQ8TAY7 271 aaPredicted RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 ENKURQ8TC29 256 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 LSM10Q969L4 123 aaKnown RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 FYTTD1Q96QD9 318 aaKnown RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 QTRT1Q9BXR0 403 aaKnown RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 ALX4Q9H161 411 aaPredicted RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 TMEM14BQ9NUH8 114 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 CACFD1Q9UGQ2 172 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 OR51B2Q9Y5P1 312 aa9.32□□□□□ -0.92
PCNA-201ENST00000379143 TET2Q6N021 2002 aaPredicted RBP9.32□□□□□ -0.92
PCNA-201ENST00000379143 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 TEX50A0A1B0GTY4 177 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 TEX22C9J3V5 150 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 SOX15O60248 233 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 DHFRP00374 187 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
PCNA-201ENST00000379143 OR4E1P0C645 316 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 P0C879 139 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 PF4V1P10720 104 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 RAB9AP51151 201 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 C4orf46Q504U0 113 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 ASPHD1Q5U4P2 390 aa9.31□□□□□ -0.92
PCNA-201ENST00000379143 TTC9CQ8N5M4 171 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms