RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PUSL1Q8N0Z8 303 aaKnown RBP13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 RBM38Q9H0Z9 239 aaKnown RBP13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 HRASLSQ9HDD0 168 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 OR2W1Q9Y3N9 320 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 PCLOQ9Y6V0 5065 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 IGLV11-55A0A075B6I3 123 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 A0A087WXM4 84 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 MAS1LP35410 378 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 RPL8P62917 257 aaKnown RBP13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 FABP5Q01469 135 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 ODF3L2Q3SX64 289 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 TSPAN14Q8NG11 270 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 CXorf58Q96LI9 332 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 SCN3BQ9NY72 215 aa13.15□□□□□ -0.3
PDLIM4-202ENST00000379018 HECTD4Q9Y4D8 3996 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 TNFSF12O43508 249 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 ZNF207O43670 478 aaKnown RBP13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 IGLV2-14P01704 120 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 HLA-GP17693 338 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 RANBP1P43487 201 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 GABARAPL2P60520 117 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 PRR20EP86478 221 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 PRR20CP86479 221 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 PRR20DP86480 221 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 PRR20BP86481 221 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 PRR20AP86496 221 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 TRAM1Q15629 374 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 ZNF502Q8TBZ5 544 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 DGCR14Q96DF8 476 aaKnown RBP13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 HSD17B10Q99714 261 aaKnown RBP13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 ATG5Q9H1Y0 275 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 C5orf66Q9H5L9 145 aa13.14□□□□□ -0.31
PDLIM4-202ENST00000379018 IGHV3-21A0A0B4J1V1 117 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 OR2T8A6NH00 312 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 TSPAN4O14817 238 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 HLA-DQB1P01920 261 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 ATF4P18848 351 aaPredicted RBP13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 GALP22466 123 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 IRF3Q14653 427 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 ZNF124Q15973 351 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 APRG1Q8IVJ8 170 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 MFSD4AQ8N468 514 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 KIR2DL5BQ8NHK3 375 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 CCDC90BQ9GZT6 254 aa13.13□□□□□ -0.31
PDLIM4-202ENST00000379018 METTL21EPA6NDL7 271 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 CGB1A6NKQ9 187 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 TGOLN2O43493 480 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 MRPS14O60783 128 aaKnown RBP13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 HRASP01112 189 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 ELLP55199 621 aaPredicted RBP13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 BRWD1-AS2P59051 145 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 Q6ZS49 121 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 GALNT14Q96FL9 552 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
PDLIM4-202ENST00000379018 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 PDCD5O14737 125 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 DEFB4AO15263 64 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 SLC22A5O76082 557 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 IFNA4P05014 189 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 RAB6AP20340 208 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 DTYMKP23919 212 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 TFPI2P48307 235 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 TIMM50Q3ZCQ8 353 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 CDNFQ49AH0 187 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 CD300LFQ8TDQ1 290 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 RARRES2Q99969 163 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 ZNF436Q9C0F3 470 aaPredicted RBP13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 PTTG2Q9NZH5 202 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
PDLIM4-202ENST00000379018 IGKV3-7A0A075B6H7 116 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 TRAV3A0A0B4J244 114 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 IFITM5A6NNB3 132 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 CTXN2P0C2S0 81 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 OR2B8PP59922 312 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 MLLT11Q13015 90 aaPredicted RBP13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 UBAC2Q8NBM4 344 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 SECTM1Q8WVN6 248 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 THYN1Q9P016 225 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 KIAA1109Q2LD37 5005 aa13.1□□□□□ -0.31
PDLIM4-202ENST00000379018 IGLC7A0M8Q6 106 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms