RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 A0A1W2PN81 502 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 ATG12O94817 140 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 IGKV1-5P01602 117 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 OR9G9P0C7N8 305 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 CHRNA7P36544 502 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 RPL27AP46776 148 aaKnown RBP14.64□□□□□ -0.07
SSU72-203ENST00000378725 IFITM3Q01628 133 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 TMEM187Q14656 261 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 CXorf66Q5JRM2 361 aaPredicted RBP14.64□□□□□ -0.07
SSU72-203ENST00000378725 H2BFWTQ7Z2G1 175 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 TMED4Q7Z7H5 227 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 SLC25A42Q86VD7 318 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 MYOZ3Q8TDC0 251 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 TSC22D3Q99576 134 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 SPIN2AQ99865 258 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 SPIN2BQ9BPZ2 258 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 TBC1D24Q9ULP9 559 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 DNHD1Q96M86 4753 aa14.64□□□□□ -0.07
SSU72-203ENST00000378725 ANK2Q01484 3957 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 CGB1A6NKQ9 187 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 TEX22C9J3V5 150 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 SNAPC5O75971 98 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 BRI3O95415 125 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 RPLP1P05386 114 aaKnown RBP14.63□□□□□ -0.07
SSU72-203ENST00000378725 MYOD1P15172 320 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 SLC6A1P30531 599 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 OR2B8PP59922 312 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 ASAH1Q13510 395 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 KIAA0141Q14154 515 aaPredicted RBP14.63□□□□□ -0.07
SSU72-203ENST00000378725 SELENOHQ8IZQ5 122 aaKnown RBP14.63□□□□□ -0.07
SSU72-203ENST00000378725 CENPSQ8N2Z9 138 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 LHFPL5Q8TAF8 219 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 PHB2Q99623 299 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 KLK15Q9H2R5 256 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 PRNDQ9UKY0 176 aa14.63□□□□□ -0.07
SSU72-203ENST00000378725 TEX50A0A1B0GTY4 177 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 M0QZ24 198 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 RAB9AP51151 201 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 UBE2MP61081 183 aaKnown RBP14.62□□□□□ -0.07
SSU72-203ENST00000378725 RPL23AP62750 156 aaKnown RBP14.62□□□□□ -0.07
SSU72-203ENST00000378725 LCNL1Q6ZST4 164 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 TTC9CQ8N5M4 171 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 OR5T1Q8NG75 326 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 RBPMSQ93062 196 aaKnown RBP14.62□□□□□ -0.07
SSU72-203ENST00000378725 IL22RA2Q969J5 263 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 COMMD5Q9GZQ3 224 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 TMEM14BQ9NUH8 114 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 FKBP11Q9NYL4 201 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 FLVCR2Q9UPI3 526 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 NSG2Q9Y328 171 aa14.62□□□□□ -0.07
SSU72-203ENST00000378725 H3BUA1 57 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 PLXNB1O43157 2135 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 ANXA3P12429 323 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 CDX1P47902 265 aaPredicted RBP14.61□□□□□ -0.07
SSU72-203ENST00000378725 C2orf68Q2NKX9 166 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 NSUN5P1Q3KNT7 163 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 TMEM65Q6PI78 240 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 ZNF695Q8IW36 515 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 FAM110DQ8TAY7 271 aaPredicted RBP14.61□□□□□ -0.07
SSU72-203ENST00000378725 SRSF8Q9BRL6 282 aaKnown RBP14.61□□□□□ -0.07
SSU72-203ENST00000378725 NDUFA4L2Q9NRX3 87 aa14.61□□□□□ -0.07
SSU72-203ENST00000378725 A0A0B4J293 547 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 HMX3A6NHT5 357 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 DBX1A6NMT0 343 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 C15orf61A6NNL5 157 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 SFT2D2O95562 160 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 APELAP0DMC3 54 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 PF4V1P10720 104 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 PPP1R1AQ13522 171 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 PRR31Q5SQ13 230 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 TMEM268Q5VZI3 342 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 MZT2BQ6NZ67 158 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 FAM219AQ8IW50 185 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 ZNF491Q8N8L2 437 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 OR1L8Q8NGR8 309 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 OR5B3Q8NH48 314 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 OR4A16Q8NH70 328 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 RRNAD1Q96FB5 475 aaKnown RBP14.6□□□□□ -0.07
SSU72-203ENST00000378725 FYTTD1Q96QD9 318 aaKnown RBP14.6□□□□□ -0.07
SSU72-203ENST00000378725 OR51B2Q9Y5P1 312 aa14.6□□□□□ -0.07
SSU72-203ENST00000378725 A0A0G2JRQ6 117 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 NPIPB5A8MRT5 1133 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 TCRBP04435 133 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 CRYGCP07315 174 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 AKR1C2P52895 323 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 SRPXP78539 464 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 IZUMO4Q1ZYL8 232 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 THOC7Q6I9Y2 204 aaKnown RBP14.59□□□□□ -0.07
SSU72-203ENST00000378725 ZNF429Q86V71 674 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 LGI3Q8N145 548 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 LRTM2Q8N967 370 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 LSM10Q969L4 123 aaKnown RBP14.59□□□□□ -0.07
SSU72-203ENST00000378725 UBE2E2Q96LR5 201 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 QTRT1Q9BXR0 403 aaKnown RBP14.59□□□□□ -0.07
SSU72-203ENST00000378725 ALX4Q9H161 411 aaPredicted RBP14.59□□□□□ -0.07
SSU72-203ENST00000378725 SLA2Q9H6Q3 261 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 PRR13Q9NZ81 148 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 ZNF257Q9Y2Q1 563 aa14.59□□□□□ -0.07
SSU72-203ENST00000378725 PIGBOS1A0A0B4J2F0 54 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 A0A1W2PRX2 142 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms