RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TEX15Q9BXT5 2789 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 C9JQL5 133 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 APOBEC3AP31941 199 aaPredicted RBP6.69□□□□□ -1.34
CKAP2-203ENST00000378037 KCNJ3P48549 501 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 OR4A47Q6IF82 309 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 ZNF429Q86V71 674 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 C11orf53Q8IXP5 236 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 RAB40CQ96S21 281 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 METTL1Q9UBP6 276 aaKnown RBP6.69□□□□□ -1.34
CKAP2-203ENST00000378037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.69□□□□□ -1.34
CKAP2-203ENST00000378037 P2RY1P47900 373 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 PSMB3P49720 205 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 RND2P52198 227 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 NCMAPQ5T1S8 102 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 NPIPB3Q92617 1050 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 SLC35E1Q96K37 410 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 ATP5SQ99766 215 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 KIAA1456Q9P272 454 aa6.69□□□□□ -1.34
CKAP2-203ENST00000378037 HRASP01112 189 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 IGKV1-39P01597 117 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 IGKV1D-39P04432 117 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 COX5AP20674 150 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 UCP1P25874 307 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TIMP3P35625 211 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 Q56UQ5 140 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TMEM200BQ69YZ2 307 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 FAM222BQ8WU58 562 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 RAB39BQ96DA2 213 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 PARP11Q9NR21 331 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 COA4Q9NYJ1 87 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 DSCAML1Q8TD84 2053 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 KBTBD11-OT1A0A1B0GTJ5 212 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 RBFOX3A6NFN3 312 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TMEM127O75204 238 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 CA2P00918 260 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 CD8AP01732 235 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 THBDP07204 575 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 HTN1P15515 57 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 IGFBP2P18065 325 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 CD1BP29016 333 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TFPI2P48307 235 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 CDC34P49427 236 aaPredicted RBP6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TCTAP57738 103 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 FAM3BP58499 235 aaPredicted RBP6.68□□□□□ -1.34
CKAP2-203ENST00000378037 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
CKAP2-203ENST00000378037 ZNF585BQ52M93 769 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 OR9G1Q8NH87 305 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 PCSK5Q92824 1860 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TRAV34A0A0B4J273 112 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TAAR5O14804 337 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 IFNA1P01562 189 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 SAA1P0DJI8 122 aaPredicted RBP6.68□□□□□ -1.34
CKAP2-203ENST00000378037 TAS2R30P59541 319 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 RND3P61587 244 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 ZNF146Q15072 292 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 WFDC3Q8IUB2 231 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 SLC24A4Q8NFF2 622 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 RAB24Q969Q5 203 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 BPESC1Q9GZL8 116 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 IDI2-AS1Q9NZ38 188 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 IL19Q9UHD0 177 aa6.68□□□□□ -1.34
CKAP2-203ENST00000378037 C1orf196B1AJZ1 125 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 COX7A2P2O60397 106 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 NDUFS6O75380 124 aaKnown RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 IGKV1D-33P01593 117 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 IGKV1-33P01594 117 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 IGHV3-11P01762 117 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 ADH4P08319 380 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 S100PP25815 95 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 RHEBQ15382 184 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 LCNL1Q6ZST4 164 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 DEFB104AQ8WTQ1 72 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 GNPNAT1Q96EK6 184 aaPredicted RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 LYRM2Q9NU23 88 aaPredicted RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 ZDHHC8Q9ULC8 765 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 NDUFB4O95168 129 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 IGLV3-1P01715 115 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 UCNP55089 124 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 FXYD3Q14802 87 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 NRN1LQ496H8 165 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 VKORC1Q9BQB6 163 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 CACFD1Q9UGQ2 172 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 ZNF705GA8MUZ8 300 aaPredicted RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 DUTP33316 252 aaKnown RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 SPATA31B1PQ5VZV4 182 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 SLC35E4Q6ICL7 350 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 CABLES2Q9BTV7 478 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 MMP26Q9NRE1 261 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 CYTL1Q9NRR1 136 aa6.67□□□□□ -1.34
CKAP2-203ENST00000378037 ZNF107Q9UII5 783 aaPredicted RBP6.67□□□□□ -1.34
CKAP2-203ENST00000378037 A0A1B0GU03 582 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 C17orf112F2Z3M2 114 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 VMA21Q3ZAQ7 101 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 OR4X1Q8NH49 305 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 WFDC12Q8WWY7 111 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms