RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PGPA6NDG6 321 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 A8MWP6 167 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 RBFOX2O43251 390 aaKnown RBP eCLIP7.38□□□□□ -1.23
PCDH9-202ENST00000377865 DLEU1O43261 78 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 PRSS1P07477 247 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 FABP2P12104 132 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM177Q53S58 311 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 DHRS13Q6UX07 377 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 PPP1R32Q7Z5V6 425 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 SHISA5Q8N114 240 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 PGLYRP4Q96LB8 373 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 TCF20Q9UGU0 1960 aaKnown RBP7.38□□□□□ -1.23
PCDH9-202ENST00000377865 STAG3L2P0CL84 134 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 SSTR5P35346 364 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 TCF23Q7RTU1 214 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 A0A1B0GW15 77 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF324O75467 553 aaPredicted RBP7.38□□□□□ -1.23
PCDH9-202ENST00000377865 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
PCDH9-202ENST00000377865 FMC1Q96HJ9 113 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 IFI27L2Q9H2X8 130 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 CLEC3BP05452 202 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 TIMP3P35625 211 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF664Q8N3J9 261 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 OR4A5Q8NH83 315 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 SEMA5BQ9P283 1151 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM189A5PLL7 270 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 RELBQ01201 579 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM190Q8WZ59 177 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 RNF166Q96A37 237 aaPredicted RBP7.37□□□□□ -1.23
PCDH9-202ENST00000377865 SIGLEC12Q96PQ1 595 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 ONECUT1Q9UBC0 465 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 PILRBQ9UKJ0 227 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 NUP210Q8TEM1 1887 aaPredicted RBP7.37□□□□□ -1.23
PCDH9-202ENST00000377865 PEX7O00628 323 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 IGFBP2P18065 325 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 PSMG4Q5JS54 123 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 PRR33A8MZF0 331 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 RFPL3SP0C7P2 107 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 C1orf210Q8IVY1 113 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 OR8B2Q96RD0 313 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 PRDM13Q9H4Q3 707 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 TNFRSF19Q9NS68 423 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 ELOVL5Q9NYP7 299 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 TRAV9-2A0A087WT02 112 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 SMIM17P0DL12 118 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 RPL27AP46776 148 aaKnown RBP7.37□□□□□ -1.23
PCDH9-202ENST00000377865 C1orf162Q8NEQ5 155 aaPredicted RBP7.37□□□□□ -1.23
PCDH9-202ENST00000377865 MYOZ3Q8TDC0 251 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 CACNG8Q8WXS5 425 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 ALKBH7Q9BT30 221 aaPredicted RBP7.37□□□□□ -1.23
PCDH9-202ENST00000377865 R4GN57 208 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 KIAA1671Q9BY89 1806 aa7.37□□□□□ -1.23
PCDH9-202ENST00000377865 IGKV3D-15A0A087WSY6 115 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 STAG3L3P0CL85 134 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 TDGF1P3P51864 188 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 CDX2Q99626 313 aaPredicted RBP7.36□□□□□ -1.23
PCDH9-202ENST00000377865 WNT10AQ9GZT5 417 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 C15orf61A6NNL5 157 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ZNHIT1O43257 154 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 GNG7O60262 68 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 YPEL1O60688 119 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ARF6P62330 175 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 YPEL2Q96QA6 119 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 KIAA1549LQ6ZVL6 1849 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 OR4C46A6NHA9 309 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 RRHO14718 337 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 TM4SF5O14894 197 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 UMODP07911 640 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM11P17152 192 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 VKORC1L1Q8N0U8 176 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ARL6IP6Q8N6S5 226 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 OCC1Q8TAD7 63 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 RND1Q92730 232 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 RPP21Q9H633 154 aaKnown RBP7.36□□□□□ -1.23
PCDH9-202ENST00000377865 KIF26AQ9ULI4 1882 aaPredicted RBP7.36□□□□□ -1.23
PCDH9-202ENST00000377865 A0A1W2PRE2 83 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 BMI1P35226 326 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 HERVK_113P61574 105 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM144Q7Z5S9 345 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 OR13A1Q8NGR1 328 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 OSR1Q8TAX0 266 aaPredicted RBP7.36□□□□□ -1.23
PCDH9-202ENST00000377865 CCL17Q92583 94 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ATG2BQ96BY7 2078 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 ALPK3Q96L96 1907 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 WIPF3A6NGB9 483 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 CIDEAO60543 219 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 RPL39P5Q59GN2 51 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 HES3Q5TGS1 186 aa7.36□□□□□ -1.23
PCDH9-202ENST00000377865 RPP25LQ8N5L8 163 aaKnown RBP7.36□□□□□ -1.23
PCDH9-202ENST00000377865 TP53BP1Q12888 1972 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-202ENST00000377865 A0A0G2JMM0 328 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 A0A1W2PPB8 328 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 A0A1W2PRS3 328 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms