RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 STAG3L3P0CL85 134 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 GATA2P23769 480 aaPredicted RBP16.77■□□□□ 0.27
CLN5-201ENST00000377453 USF2Q15853 346 aaPredicted RBP16.77■□□□□ 0.27
CLN5-201ENST00000377453 TMEM144Q7Z5S9 345 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 MDFIC2A0A1B0GVS7 189 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 K7EN84 100 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 OPRK1P41145 380 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 OR5I1Q13606 314 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 CT45A1Q5HYN5 189 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 CT45A3Q8NHU0 189 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 STARD4Q96DR4 205 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 ELOVL5Q9NYP7 299 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 CALYQ9NYX4 217 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 IGFBP2P18065 325 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 TIMP3P35625 211 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 TRIP6Q15654 476 aaKnown RBP16.76■□□□□ 0.27
CLN5-201ENST00000377453 TEX38Q6PEX7 206 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 GBGT1Q8N5D6 347 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 STPG3Q8N7X2 389 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 ITLN1Q8WWA0 313 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 DCAF16Q9NXF7 216 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 DKK4Q9UBT3 224 aa16.76■□□□□ 0.27
CLN5-201ENST00000377453 ROS1P08922 2347 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 DSCAMO60469 2012 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 SAA2-SAA4A0A096LPE2 208 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 ZNF891A8MT65 544 aaPredicted RBP16.75■□□□□ 0.27
CLN5-201ENST00000377453 EREGO14944 169 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 MMP23AO75900 390 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 IGLV1-44P01699 117 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 SAA2P0DJI9 122 aaPredicted RBP16.75■□□□□ 0.27
CLN5-201ENST00000377453 TCTEX1D1Q8N7M0 179 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 ZNF71Q9NQZ8 489 aaPredicted RBP16.75■□□□□ 0.27
CLN5-201ENST00000377453 TMPRSS2O15393 492 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 SPINK4O60575 86 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 SCGB1D1O95968 90 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 CA2P00918 260 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 EFNB3Q15768 340 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 MLANAQ16655 118 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 SEM1Q6ZVN7 128 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 BHLHA15Q7RTS1 189 aaPredicted RBP16.75■□□□□ 0.27
CLN5-201ENST00000377453 OR4P4Q8NGL7 312 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 TMEM18Q96B42 140 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 JPT1Q9UK76 154 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 CEP250Q9BV73 2442 aa16.75■□□□□ 0.27
CLN5-201ENST00000377453 GCHFRP30047 84 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 RPL31P62899 125 aaKnown RBP16.74■□□□□ 0.27
CLN5-201ENST00000377453 C17orf58Q2M2W7 97 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 DNLZQ5SXM8 178 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 MBNL2Q5VZF2 373 aaKnown RBP16.74■□□□□ 0.27
CLN5-201ENST00000377453 OR4A47Q6IF82 309 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 LYG1Q8N1E2 194 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 F2Z2F3 143 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 MGST3O14880 152 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 CGAP01215 116 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 MIR17HGQ75NE6 70 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 FAM216AQ8WUB2 273 aa16.74■□□□□ 0.27
CLN5-201ENST00000377453 SPAARA0A1B0GVQ0 90 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 PRR33A8MZF0 331 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 YPEL1O60688 119 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 PAX1P15863 534 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 PAX5Q02548 391 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 RAB1CQ92928 201 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 YPEL2Q96QA6 119 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 ATG101Q9BSB4 218 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 PLCE1Q9P212 2302 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 MKRN2OSH3BPM6 223 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 CXorf1O96002 111 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 DDB2Q92466 427 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 PROCRQ9UNN8 238 aa16.73■□□□□ 0.27
CLN5-201ENST00000377453 YLPM1P49750 1951 aaKnown RBP16.73■□□□□ 0.27
CLN5-201ENST00000377453 NPY1RP25929 384 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 CBLN4Q9NTU7 201 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 LSM4Q9Y4Z0 139 aaKnown RBP16.72■□□□□ 0.27
CLN5-201ENST00000377453 SLC25A15Q9Y619 301 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 AARDQ4LEZ3 155 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 C22orf34Q6ZV56 151 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 SLC24A4Q8NFF2 622 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 OR10G8Q8NGN5 311 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 TP53TG3Q9ULZ0 132 aa16.72■□□□□ 0.27
CLN5-201ENST00000377453 C15orf61A6NNL5 157 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 SLC35B1P78383 322 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 LCN2P80188 198 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 DEFB109BQ30KR1 87 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 PLSCR4Q9NRQ2 329 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 GCGP01275 180 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 ZNF90Q03938 601 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 RND1Q92730 232 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 NPVFQ9HCQ7 196 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 IDI2-AS1Q9NZ38 188 aa16.71■□□□□ 0.27
CLN5-201ENST00000377453 IGKV1-16P04430 117 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 RPP30P78346 268 aaKnown RBP16.7■□□□□ 0.26
CLN5-201ENST00000377453 FAM216BQ8N7L0 139 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 FKBP11Q9NYL4 201 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 F2RL2O00254 374 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 TDRG1Q3Y452 100 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 TGIF2LXQ8IUE1 241 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 CCL13Q99616 98 aa16.7■□□□□ 0.26
CLN5-201ENST00000377453 POLR3KQ9Y2Y1 108 aaPredicted RBP16.7■□□□□ 0.26
CLN5-201ENST00000377453 MPDU1O75352 247 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms