RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 YPEL4Q96NS1 127 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 ITPR1Q14643 2758 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 DEFA4P12838 97 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 APOBEC3AP31941 199 aaPredicted RBP16.54■□□□□ 0.24
VSX1-202ENST00000376709 POU2AF1Q16633 256 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 TREML4Q6UXN2 200 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 SLC24A4Q8NFF2 622 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 OR51B2Q9Y5P1 312 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 PRSS46E5RG02 174 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 CCL21O00585 134 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 CDC34P49427 236 aaPredicted RBP16.54■□□□□ 0.24
VSX1-202ENST00000376709 SNRPEP62304 92 aaKnown RBP16.54■□□□□ 0.24
VSX1-202ENST00000376709 Q8N7P7 452 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 ST6GALNAC3Q8NDV1 305 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 TMEM170AQ8WVE7 144 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 PRNDQ9UKY0 176 aa16.54■□□□□ 0.24
VSX1-202ENST00000376709 ARFGEF3Q5TH69 2177 aa16.53■□□□□ 0.24
VSX1-202ENST00000376709 DVL1O14640 695 aa16.53■□□□□ 0.24
VSX1-202ENST00000376709 NPY1RP25929 384 aa16.53■□□□□ 0.24
VSX1-202ENST00000376709 ZNF833PQ6ZTB9 187 aa16.53■□□□□ 0.24
VSX1-202ENST00000376709 PNRC1Q12796 327 aaPredicted RBP16.53■□□□□ 0.24
VSX1-202ENST00000376709 LINC01560Q8TB33 94 aa16.53■□□□□ 0.24
VSX1-202ENST00000376709 MANBALQ9NQG1 85 aa16.53■□□□□ 0.24
VSX1-202ENST00000376709 IGHV1-69-2A0A0G2JMI3 117 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 B4DEV8 164 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 B9A039 149 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 SOX15O60248 233 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 MYOD1P15172 320 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 GRNP28799 593 aaKnown RBP16.52■□□□□ 0.24
VSX1-202ENST00000376709 CD81P60033 236 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 ZNF343Q6P1L6 599 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 CTSZQ9UBR2 303 aa16.52■□□□□ 0.24
VSX1-202ENST00000376709 J3QR06 171 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 TNFRSF13BO14836 293 aaPredicted RBP16.51■□□□□ 0.23
VSX1-202ENST00000376709 APOA2P02652 100 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 EFNB3Q15768 340 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 GCSAMLQ5JQS6 135 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 OR10X1Q8NGY0 326 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 MRPL20Q9BYC9 149 aaKnown RBP16.51■□□□□ 0.23
VSX1-202ENST00000376709 SIRT7Q9NRC8 400 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 SRRM4A7MD48 611 aaKnown RBP16.51■□□□□ 0.23
VSX1-202ENST00000376709 OPN1MWP04001 364 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 OPN1MW2P0DN77 364 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 OPN1MW3P0DN78 364 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 MAS1LP35410 378 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 OPRK1P41145 380 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 PLEKHA3Q9HB20 300 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 URGCP-MRPS24S4R325 110 aa16.51■□□□□ 0.23
VSX1-202ENST00000376709 A0A1W2PPV4 95 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 UPK2O00526 184 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 PLAUP00749 431 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 CA2P00918 260 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 S100A6P06703 90 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 CHRNB4P30926 498 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 GATAD1Q8WUU5 269 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 MALSU1Q96EH3 234 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 MGST2Q99735 147 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 NPVFQ9HCQ7 196 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 ZNF257Q9Y2Q1 563 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 REG1BP48304 166 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 ZNF674Q2M3X9 581 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 OR4F5Q8NH21 305 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 OR4F4Q96R69 305 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 SMIM7Q9BQ49 75 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 GGTLC1Q9BX51 225 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 KAAG1Q9UBP8 84 aa16.5■□□□□ 0.23
VSX1-202ENST00000376709 NBASA2RRP1 2371 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 CXorf65A6NEN9 183 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 C5orf52A6NGY3 159 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 SEC14L6B5MCN3 397 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 KBTBD11O94819 623 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 SAA1P0DJI8 122 aaPredicted RBP16.49■□□□□ 0.23
VSX1-202ENST00000376709 LOXP28300 417 aaPredicted RBP16.49■□□□□ 0.23
VSX1-202ENST00000376709 ELOBQ15370 118 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 WDR25Q64LD2 544 aaPredicted RBP16.49■□□□□ 0.23
VSX1-202ENST00000376709 OSR1Q8TAX0 266 aaPredicted RBP16.49■□□□□ 0.23
VSX1-202ENST00000376709 Q8WTZ3 238 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 HARBI1Q96MB7 349 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 PATZ1Q9HBE1 687 aaKnown RBP16.49■□□□□ 0.23
VSX1-202ENST00000376709 SDF2L1Q9HCN8 221 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 PXMP4Q9Y6I8 212 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 TNCP24821 2201 aa16.49■□□□□ 0.23
VSX1-202ENST00000376709 IL6RP08887 468 aaPredicted RBP16.48■□□□□ 0.23
VSX1-202ENST00000376709 PRCDQ00LT1 54 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 CDSNQ15517 529 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 ARSJQ5FYB0 599 aaPredicted RBP16.48■□□□□ 0.23
VSX1-202ENST00000376709 FKBP11Q9NYL4 201 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 BET1LQ9NYM9 111 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 ANKHD1Q8IWZ3 2542 aaKnown RBP16.48■□□□□ 0.23
VSX1-202ENST00000376709 ZNF98A6NK75 572 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 TMEM250H0YL14 139 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 PAGE4O60829 102 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 CXCL1P09341 107 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 MIC13Q5XKP0 118 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 RPUSD4Q96CM3 377 aaKnown RBP16.48■□□□□ 0.23
VSX1-202ENST00000376709 KCNIP2Q9NS61 270 aa16.48■□□□□ 0.23
VSX1-202ENST00000376709 PCP4L1A6NKN8 68 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 H0YJW9 148 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 ADORA2A-AS1P86434 159 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 TEPPQ6URK8 271 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms