RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RAMP3O60896 148 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 CEACAM21Q3KPI0 293 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 SPINK9Q5DT21 86 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
MSH5-204ENST00000375755 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 K7EN84 100 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 TOMM40O96008 361 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 HINT1P49773 126 aaPredicted RBP10.75□□□□□ -0.69
MSH5-204ENST00000375755 LGALS4P56470 323 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 LINC00470Q9BZP3 86 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 NPIPB11E5RHQ5 1161 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 SIRPB1O00241 398 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 NXPH2O95156 264 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 AMTP48728 403 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 TAAR6Q96RI8 345 aa10.75□□□□□ -0.69
MSH5-204ENST00000375755 ALKBH7Q9BT30 221 aaPredicted RBP10.75□□□□□ -0.69
MSH5-204ENST00000375755 ODAMA1E959 279 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 LRRC30A6NM36 301 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 EDDM3BP56851 147 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 RCHY1Q96PM5 261 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 TRIB1Q96RU8 372 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 WNT10AQ9GZT5 417 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 PRDM14Q9GZV8 571 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 COX11Q9Y6N1 276 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 INTS1Q8N201 2190 aaKnown RBP10.74□□□□□ -0.69
MSH5-204ENST00000375755 C17orf112F2Z3M2 114 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 MMP23AO75900 390 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 CELA3BP08861 270 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 P0C879 139 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 PMCHP20382 165 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 PCBD1P61457 104 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 ZNF816Q0VGE8 651 aaPredicted RBP10.74□□□□□ -0.69
MSH5-204ENST00000375755 COLCA1Q6ZS62 124 aa10.74□□□□□ -0.69
MSH5-204ENST00000375755 TRAV9-1A0A075B6T8 112 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 ZNF253O75346 499 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 ARL14EPLP0DKL9 152 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 ST6GALNAC3Q8NDV1 305 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 A0A1W2PPV4 95 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 A0A1W2PS18 150 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 NHLH1Q02575 133 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 TMEM249Q2WGJ8 235 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 SPATA46Q5T0L3 261 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 RRHO14718 337 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 C3orf79P0CE67 100 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 ATOH7Q8N100 152 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 GMPPAQ96IJ6 420 aaPredicted RBP10.73□□□□□ -0.69
MSH5-204ENST00000375755 CHODLQ9H9P2 273 aa10.73□□□□□ -0.69
MSH5-204ENST00000375755 ACACAQ13085 2346 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 USF3Q68DE3 2245 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 LYZL6O75951 148 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 ZNF83P51522 516 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 RPL30P62888 115 aaKnown RBP10.72□□□□□ -0.69
MSH5-204ENST00000375755 FOXF2Q12947 444 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 IGFL2Q6UWQ7 119 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 MMD2Q8IY49 270 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 ZNF738Q8NE65 137 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 RAB1CQ92928 201 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 SFXN3Q9BWM7 321 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.72□□□□□ -0.69
MSH5-204ENST00000375755 YTHDF2Q9Y5A9 579 aaKnown RBP10.72□□□□□ -0.69
MSH5-204ENST00000375755 KLK10O43240 276 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 SPINK4O60575 86 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 S1PR2O95136 353 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 COL8A2P25067 703 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 TSPOP30536 169 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 MRPL21Q7Z2W9 205 aaKnown RBP10.72□□□□□ -0.69
MSH5-204ENST00000375755 NIT1Q86X76 327 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 OR8I2Q8N0Y5 310 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 FAM58AQ8N1B3 248 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 C5orf30Q96GV9 206 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 KCNS1Q96KK3 526 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 RPH3ALQ9UNE2 315 aa10.72□□□□□ -0.69
MSH5-204ENST00000375755 VWA1Q6PCB0 445 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 MDP1Q86V88 176 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 CNEP1R1Q8N9A8 125 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 NAT8BQ9UHF3 227 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 SELENOKQ9Y6D0 94 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 IGHV2OR16-5A0A0B4J2B6 119 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 DPRXA6NFQ7 191 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 RPEL1Q2QD12 228 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 FAM53AQ6NSI3 398 aaPredicted RBP10.71□□□□□ -0.69
MSH5-204ENST00000375755 LINC00596Q86U02 117 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 C9orf106Q8NAJ2 232 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 POM121L2Q96KW2 1035 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 GNB1LQ9BYB4 327 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 TRAPPC2LQ9UL33 140 aa10.71□□□□□ -0.69
MSH5-204ENST00000375755 SAA2-SAA4A0A096LPE2 208 aa10.71□□□□□ -0.7
MSH5-204ENST00000375755 RHBDL1O75783 438 aa10.71□□□□□ -0.7
MSH5-204ENST00000375755 PRRX1P54821 245 aa10.71□□□□□ -0.7
MSH5-204ENST00000375755 RPL31P62899 125 aaKnown RBP10.71□□□□□ -0.7
MSH5-204ENST00000375755 FAM19A2Q8N3H0 131 aa10.71□□□□□ -0.7
MSH5-204ENST00000375755 IGHV3-64DA0A0J9YX35 117 aa10.7□□□□□ -0.7
MSH5-204ENST00000375755 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
MSH5-204ENST00000375755 IGHV1-2P23083 117 aa10.7□□□□□ -0.7
MSH5-204ENST00000375755 BRWD1-AS2P59051 145 aa10.7□□□□□ -0.7
MSH5-204ENST00000375755 FBLN7Q53RD9 439 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms