RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
MSH5-203ENST00000375750 RNF114Q9Y508 228 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 ACACAQ13085 2346 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 PDE6DO43924 150 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 LCN2P80188 198 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
MSH5-203ENST00000375750 C1orf194Q5T5A4 169 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 TOMM20LQ6UXN7 152 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 CIB3Q96Q77 187 aaPredicted RBP12.55□□□□□ -0.4
MSH5-203ENST00000375750 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
MSH5-203ENST00000375750 DKK4Q9UBT3 224 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 TMPRSS2O15393 492 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 ZNF25P17030 456 aaPredicted RBP12.54□□□□□ -0.4
MSH5-203ENST00000375750 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 PRAMEF5Q5TYX0 476 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 SLC35E4Q6ICL7 350 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 ACP7Q6ZNF0 438 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
MSH5-203ENST00000375750 SPACA3Q8IXA5 215 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 ZBTB34Q8NCN2 500 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 CMTM2Q8TAZ6 248 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
MSH5-203ENST00000375750 HES4Q9HCC6 221 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 SMG1Q96Q15 3661 aaKnown RBP12.54□□□□□ -0.4
MSH5-203ENST00000375750 SERF1AO75920 110 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 TIMP3P35625 211 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
MSH5-203ENST00000375750 ALKBH2Q6NS38 261 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 ABHD17AQ96GS6 310 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 CADP27708 2225 aa12.54□□□□□ -0.4
MSH5-203ENST00000375750 TDGF1P3P51864 188 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 ZNF90Q03938 601 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
MSH5-203ENST00000375750 WDR82Q6UXN9 313 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 CD177Q8N6Q3 437 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 OR10G8Q8NGN5 311 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 DIRC2Q96SL1 478 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 M0R143 59 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 M0R1X1 148 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 HPRT1P00492 218 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 SLC35B1P78383 322 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 FOXL1Q12952 345 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 KRTCAP3Q53RY4 240 aa12.53□□□□□ -0.4
MSH5-203ENST00000375750 IGHV3OR15-7A0A075B7D8 119 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 IQCF6A8MYZ5 107 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 AHRRA9YTQ3 701 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 ACTL6BO94805 426 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 DUTP33316 252 aaKnown RBP12.52□□□□□ -0.4
MSH5-203ENST00000375750 GPR12P47775 334 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 ZNF134P52741 427 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 BATFQ16520 125 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 Q6ZT83 130 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 ZCCHC14Q8WYQ9 949 aaKnown RBP12.52□□□□□ -0.4
MSH5-203ENST00000375750 HSPB9Q9BQS6 159 aa12.52□□□□□ -0.4
MSH5-203ENST00000375750 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.4
MSH5-203ENST00000375750 PIEZO2Q9H5I5 2752 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 KIR2DL5BA0A0G2JN68 375 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 KIR2DL5BA0A0G2JPC4 375 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 OR10J1P30954 320 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 IER3P46695 156 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 RPL31P62899 125 aaKnown RBP12.52□□□□□ -0.41
MSH5-203ENST00000375750 KIR2DL5AQ8N109 375 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 RPRMLQ8N4K4 120 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 OR4A16Q8NH70 328 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.41
MSH5-203ENST00000375750 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.41
MSH5-203ENST00000375750 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.41
MSH5-203ENST00000375750 STAG3L2P0CL84 134 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 STAG3L3P0CL85 134 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 GABRA6Q16445 453 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 KIAA1644Q3SXP7 199 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 GNG12Q9UBI6 72 aa12.52□□□□□ -0.41
MSH5-203ENST00000375750 C15orf65H3BRN8 121 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 IRF2P14316 349 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 RAB4AP20338 218 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 SPRNQ5BIV9 151 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 TMEM106BQ9NUM4 274 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 TMEM210A6NLX4 147 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
MSH5-203ENST00000375750 ZNF718Q3SXZ3 478 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 ARSJQ5FYB0 599 aaPredicted RBP12.51□□□□□ -0.41
MSH5-203ENST00000375750 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 OR1L6Q8NGR2 347 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
MSH5-203ENST00000375750 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
MSH5-203ENST00000375750 ZNF71Q9NQZ8 489 aaPredicted RBP12.51□□□□□ -0.41
MSH5-203ENST00000375750 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 TNCP24821 2201 aa12.51□□□□□ -0.41
MSH5-203ENST00000375750 ARFGEF3Q5TH69 2177 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 PRSS46E5RG02 174 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 TIMM8AO60220 97 aaPredicted RBP12.5□□□□□ -0.41
MSH5-203ENST00000375750 YPEL1O60688 119 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 TNFSF13O75888 250 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 CD99P14209 185 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 VDAC2P45880 294 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms