RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PJVKQ0ZLH3 352 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 POU2AF1Q16633 256 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 SP6Q3SY56 376 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 VMA21Q3ZAQ7 101 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 PPP1R27Q86WC6 154 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 PUSL1Q8N0Z8 303 aaKnown RBP9.43□□□□□ -0.9
LSM2-208ENST00000375661 CCDC71LQ8N9Z2 235 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 TP53RKQ96S44 253 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 CLCC1Q96S66 551 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 NAA60Q9H7X0 242 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 COMMD9Q9P000 198 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 C3orf85A0A1B0GTC6 90 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 CRYM-AS1A6NIL9 109 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 H0Y980 276 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 ARPC1BO15143 372 aaKnown RBP9.42□□□□□ -0.9
LSM2-208ENST00000375661 CA2P00918 260 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 HRASP01112 189 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 IL6RP08887 468 aaPredicted RBP9.42□□□□□ -0.9
LSM2-208ENST00000375661 OR8U8P0C7N1 319 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 NQO2P16083 231 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 CFHR3Q02985 330 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 PLGLAQ15195 96 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 RBMS2Q15434 407 aaKnown RBP9.42□□□□□ -0.9
LSM2-208ENST00000375661 PRSS8Q16651 343 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 ZNF562Q6V9R5 426 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 ZNF429Q86V71 674 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 RHOVQ96L33 236 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 OR51J1Q9H342 316 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 FLVCR2Q9UPI3 526 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 FBXO7Q9Y3I1 522 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 TENM2Q9NT68 2774 aa9.42□□□□□ -0.9
LSM2-208ENST00000375661 RYR2Q92736 4967 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 TRAV3A0A0B4J244 114 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 TEX13DA0A0J9YY54 714 aaPredicted RBP9.41□□□□□ -0.9
LSM2-208ENST00000375661 OR2A4O95047 310 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 LY86O95711 162 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 IGF1P05019 195 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 OR5AC1P0C628 307 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 EGR2P11161 476 aaPredicted RBP9.41□□□□□ -0.9
LSM2-208ENST00000375661 RPA2P15927 270 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 VDAC1P21796 283 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 UCP1P25874 307 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 PSMB8P28062 276 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 SUPT4H1P63272 117 aaKnown RBP9.41□□□□□ -0.9
LSM2-208ENST00000375661 DHODHQ02127 395 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 ASAH1Q13510 395 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 TMED4Q7Z7H5 227 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 OR11H1Q8NG94 326 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 TMEM167AQ8TBQ9 72 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 GALNT14Q96FL9 552 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 OR2A7Q96R45 310 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 CITED4Q96RK1 184 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 ZNF430Q9H8G1 570 aaPredicted RBP9.41□□□□□ -0.9
LSM2-208ENST00000375661 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
LSM2-208ENST00000375661 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.9
LSM2-208ENST00000375661 MARCH11A6NNE9 402 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 UPK2O00526 184 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 ATP6V0E1O15342 81 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 B3GALNT1O75752 331 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 KBTBD11O94819 623 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 CDS2O95674 445 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 KRASP01116 189 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 AKR1C4P17516 323 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 G6PCP35575 357 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 RUNX1Q01196 453 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 TMEM187Q14656 261 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 FXYD3Q14802 87 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 SGPP2Q8IWX5 399 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 CADM3Q8N126 398 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 LHFPL5Q8TAF8 219 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 MYOZ3Q8TDC0 251 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 SEC22AQ96IW7 307 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 UBE2E2Q96LR5 201 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 FAM103A1Q9BTL3 118 aaKnown RBP9.4□□□□□ -0.9
LSM2-208ENST00000375661 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 PARP11Q9NR21 331 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
LSM2-208ENST00000375661 G3V318 75 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 SERPINE2P07093 398 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 OR9G9P0C7N8 305 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
LSM2-208ENST00000375661 GNB1P62873 340 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 ZNF616Q08AN1 781 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 TMEM128Q5BJH2 165 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 SLC25A42Q86VD7 318 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 SELENOHQ8IZQ5 122 aaKnown RBP9.39□□□□□ -0.91
LSM2-208ENST00000375661 CENPSQ8N2Z9 138 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms