RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 A0A0G2JMM0 328 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 A0A1W2PPB8 328 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 A0A1W2PRS3 328 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 KIR3DP1A8MWS1 328 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 CLDN18P56856 261 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 CTAG1AP78358 180 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 ZNF600Q6ZNG1 722 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 OR4D5Q8NGN0 318 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 IMMP2LQ96T52 175 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 SHANK1Q9Y566 2161 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 DPRXA6NFQ7 191 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 C5orf52A6NGY3 159 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 J3KRW8 73 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 EFNA2O43921 213 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 GDF9O60383 454 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 OTX1P32242 354 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 LTBRP36941 435 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 FOXD3Q9UJU5 478 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 CGAP01215 116 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 C1orf185Q5T7R7 199 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 PCSK4Q6UW60 755 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 ACP7Q6ZNF0 438 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 ATG101Q9BSB4 218 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 MRPL32Q9BYC8 188 aaKnown RBP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 GP6Q9HCN6 339 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 PI4KAP42356 2102 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 WDR81Q562E7 1941 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 GAGE10A6NGK3 116 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 KIR2DL2P43627 348 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 CCDC144NLQ6NUI1 221 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 MUC15Q8N387 334 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 GTF3AQ92664 365 aaKnown RBP9.75□□□□□ -0.85
PTCH1-203ENST00000375274 IGKV3-7A0A075B6H7 116 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 SCO2A0A1W2PP80 73 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 E9PQ18 207 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 CKS2P33552 79 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 PSG7Q13046 419 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 SPANXN1Q5VSR9 72 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 OR13A1Q8NGR1 328 aa9.75□□□□□ -0.85
PTCH1-203ENST00000375274 IGKV1-12A0A0C4DH73 117 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 H3BTX0 84 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 F2RL2O00254 374 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 IGKV1D-12P01611 117 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 OR4A5Q8NH83 315 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 TAS2R60P59551 318 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 RSPO3Q9BXY4 272 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 KLF7O75840 302 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 HLA-DRB1P01911 266 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 ERVFRD-1P60508 538 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 PLPPR1Q8TBJ4 325 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 ZCCHC14Q8WYQ9 949 aaKnown RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 NOTCH3Q9UM47 2321 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 GPX4P36969 197 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-203ENST00000375274 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 ATP1A1-AS1Q5TC04 95 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 VWA8A3KMH1 1905 aa9.74□□□□□ -0.85
PTCH1-203ENST00000375274 FANCMQ8IYD8 2048 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 LNP1A1A4G5 178 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 UMODP07911 640 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 IGFBP2P18065 325 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 UQCRFS1P47985 274 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 COMPP49747 757 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-203ENST00000375274 HERVK_113P61574 105 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 TWIST1Q15672 202 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 ECSCRQ19T08 205 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 NEU1Q99519 415 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 DCTN5Q9BTE1 182 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 TBL2Q9Y4P3 447 aaKnown RBP9.73□□□□□ -0.85
PTCH1-203ENST00000375274 HILPDAQ9Y5L2 63 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 WDR90Q96KV7 1748 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 REG1AP05451 166 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 CD55P08174 381 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 NDUFAF3Q9BU61 184 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 LOC102723996A0A087X1L8 192 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 RNF224P0DH78 156 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 CRYGSP22914 178 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 OR5R1Q8NH85 324 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 TMEM170AQ8WVE7 144 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 PARD6GQ9BYG4 376 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-203ENST00000375274 C1QTNF9BB2RNN3 333 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 CECR9P0C854 216 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 WDR31Q8NA23 367 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 OR9G1Q8NH87 305 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 TMEM186Q96B77 213 aa9.73□□□□□ -0.85
PTCH1-203ENST00000375274 FER1L5A0AVI2 2057 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 CFHR1Q03591 330 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 SRSF4Q08170 494 aaKnown RBP9.72□□□□□ -0.85
PTCH1-203ENST00000375274 STPG1Q5TH74 334 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 WNT10AQ9GZT5 417 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 CADP27708 2225 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 OR4C46A6NHA9 309 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms