RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 G3V4G9 280 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 H0YIZ8 118 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 K7EPK0 472 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SHOXO15266 292 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 DEDDO75618 318 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PRB2P02812 416 aaPredicted RBP8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LYL1P12980 280 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NUP62P37198 522 aaPredicted RBP8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IER3P46695 156 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LGALS7P47929 136 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RPS16P62249 146 aaKnown RBP8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 POU2AF1Q16633 256 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IZUMO4Q1ZYL8 232 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LGALSLQ3ZCW2 172 aaPredicted RBP8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CXorf66Q5JRM2 361 aaPredicted RBP8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SSX9Q7RTT3 188 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LHFPL4Q7Z7J7 247 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FOXRED2Q8IWF2 684 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR8H3Q8N146 312 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FAM71E2Q8N5Q1 922 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR4A16Q8NH70 328 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 GRPEL2Q8TAA5 225 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MALSU1Q96EH3 234 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RHOVQ96L33 236 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MBD2Q9UBB5 411 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 HILPDAQ9Y5L2 63 aa8.74□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FAM90A26D6RGX4 464 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 E5RGE8 158 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 WRBO00258 174 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NPFFO15130 113 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ARPC5O15511 151 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RBMXL2O75526 392 aaKnown RBP8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IGKV1-16P04430 117 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IL6RP08887 468 aaPredicted RBP8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR9G9P0C7N8 305 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PVALBP20472 110 aaPredicted RBP8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CD1BP29016 333 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SSX2Q16385 188 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 BEAN1Q3B7T3 259 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LDLRAD2Q5SZI1 272 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LAMTOR1Q6IAA8 161 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CCDC144NLQ6NUI1 221 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 C9orf62Q8N4C0 152 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 DCUN1D4Q92564 292 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RNF5Q99942 180 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MFFQ9GZY8 342 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR5AC2Q9NZP5 309 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CACFD1Q9UGQ2 172 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TNFSF18Q9UNG2 199 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RCL1Q9Y2P8 373 aaKnown RBP8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NSG2Q9Y328 171 aa8.73□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PLXNB1O43157 2135 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IGHV3-72A0A0B4J1Y9 119 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A1W2PPI3 338 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 L7N2F9 121 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 UPK2O00526 184 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CHST1O43916 411 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MED6O75586 246 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CXCL2P19875 107 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 C4BPBP20851 252 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 POLR2GP62487 172 aaKnown RBP eCLIP8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 VAMP2P63027 116 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FBLN7Q53RD9 439 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR4A47Q6IF82 309 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ACOT7LQ6ZUV0 252 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR4A5Q8NH83 315 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 HARBI1Q96MB7 349 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MAGT1Q9H0U3 335 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 HSPB11Q9Y547 144 aa8.72□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A0D9SG52 128 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SYNGR2O43760 224 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR2F2O95006 317 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 NXPH3O95157 252 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 P2RY1P47900 373 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 UBE2KP61086 200 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TNFRSF9Q07011 255 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR2F1Q13607 317 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 HABP2Q14520 560 aaPredicted RBP8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 AARDQ4LEZ3 155 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TMUB2Q71RG4 321 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PUSL1Q8N0Z8 303 aaKnown RBP8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 DYNAPQ8N1N2 210 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR52E5Q8NH55 327 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 VSTM2AQ8TAG5 236 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CFHR4Q92496 578 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RBMXL1Q96E39 390 aaKnown RBP8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RITA1Q96K30 269 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RAB40CQ96S21 281 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TSNAXQ99598 290 aaKnown RBP8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 QTRT1Q9BXR0 403 aaKnown RBP8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RBKSQ9H477 322 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 C16orf95Q9H693 158 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FKBP11Q9NYL4 201 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms