RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 GLYATL2Q8WU03 294 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 RBPMSQ93062 196 aaKnown RBP11.97□□□□□ -0.49
PFDN6-202ENST00000374607 TMEM230Q96A57 120 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 SEC22AQ96IW7 307 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 PDCD10Q9BUL8 212 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 HINT2Q9BX68 163 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 COA4Q9NYJ1 87 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 FLVCR2Q9UPI3 526 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 NSG2Q9Y328 171 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 OR51B2Q9Y5P1 312 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 TSSC4Q9Y5U2 329 aaPredicted RBP11.97□□□□□ -0.49
PFDN6-202ENST00000374607 NUBP2Q9Y5Y2 271 aa11.97□□□□□ -0.49
PFDN6-202ENST00000374607 TRAV3A0A0B4J244 114 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 NUDT19A8MXV4 375 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 M0QZ24 198 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 CDS2O95674 445 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 ELANEP08246 267 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 MECP2P51608 486 aaKnown RBP11.96□□□□□ -0.49
PFDN6-202ENST00000374607 OR2B8PP59922 312 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
PFDN6-202ENST00000374607 FOXE3Q13461 319 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 SLC25A42Q86VD7 318 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
PFDN6-202ENST00000374607 C20orf85Q9H1P6 137 aa11.96□□□□□ -0.49
PFDN6-202ENST00000374607 TRAV6A0A075B6T7 132 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 HLA-AP01891 365 aaKnown RBP11.95□□□□□ -0.5
PFDN6-202ENST00000374607 TCRBP04435 133 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 OR9G9P0C7N8 305 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 EGR2P11161 476 aaPredicted RBP11.95□□□□□ -0.5
PFDN6-202ENST00000374607 BTCP35070 178 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
PFDN6-202ENST00000374607 PPP1R1AQ13522 171 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 TMEM187Q14656 261 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 NDUFA11Q86Y39 141 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 MRPL41Q8IXM3 137 aaKnown RBP11.95□□□□□ -0.5
PFDN6-202ENST00000374607 SELENOHQ8IZQ5 122 aaKnown RBP11.95□□□□□ -0.5
PFDN6-202ENST00000374607 OR1L8Q8NGR8 309 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 MS4A10Q96PG2 267 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 TBC1D24Q9ULP9 559 aa11.95□□□□□ -0.5
PFDN6-202ENST00000374607 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 SFT2D2O95562 160 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 DHFRP00374 187 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 IGHG4P01861 327 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 TRAPPC2P0DI81 140 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 TRAPPC2BP0DI82 140 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 DEFA4P12838 97 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
PFDN6-202ENST00000374607 SLC6A1P30531 599 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 MRGPRG-AS1Q2M3A8 158 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 CADM3Q8N126 398 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 MINDY2Q8NBR6 621 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 COQ8AQ8NI60 647 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 IL22RA2Q969J5 263 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
PFDN6-202ENST00000374607 ZFP57Q9NU63 452 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 NUDT15Q9NV35 164 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 PRR13Q9NZ81 148 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
PFDN6-202ENST00000374607 TENM1Q9UKZ4 2725 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 C15orf61A6NNL5 157 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 IFNA17P01571 189 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 IGKV1-5P01602 117 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 TRGV3P03979 118 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 RPLP1P05386 114 aaKnown RBP11.93□□□□□ -0.5
PFDN6-202ENST00000374607 FGF2P09038 288 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 H2AFB2P0C5Z0 115 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 OR4E1P0C645 316 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 MYOD1P15172 320 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 PPIFP30405 207 aaKnown RBP11.93□□□□□ -0.5
PFDN6-202ENST00000374607 TPPP2P59282 170 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 SUPT4H1P63272 117 aaKnown RBP11.93□□□□□ -0.5
PFDN6-202ENST00000374607 SSBP2P81877 361 aaPredicted RBP11.93□□□□□ -0.5
PFDN6-202ENST00000374607 CD83Q01151 205 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 CFHR3Q02985 330 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 THOC7Q6I9Y2 204 aaKnown RBP11.93□□□□□ -0.5
PFDN6-202ENST00000374607 LCNL1Q6ZST4 164 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 SLC35G3Q8N808 338 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 OR5B3Q8NH48 314 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
PFDN6-202ENST00000374607 SLA2Q9H6Q3 261 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 ENY2Q9NPA8 101 aa11.93□□□□□ -0.5
PFDN6-202ENST00000374607 CYB5BO43169 146 aa11.92□□□□□ -0.5
PFDN6-202ENST00000374607 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
PFDN6-202ENST00000374607 RAB9AP51151 201 aa11.92□□□□□ -0.5
PFDN6-202ENST00000374607 IFITM3Q01628 133 aa11.92□□□□□ -0.5
PFDN6-202ENST00000374607 IZUMO4Q1ZYL8 232 aa11.92□□□□□ -0.5
PFDN6-202ENST00000374607 PLET1Q6UQ28 207 aa11.92□□□□□ -0.5
PFDN6-202ENST00000374607 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms