RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 HIST1H2BAQ96A08 127 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 GPR132Q9UNW8 380 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 LOC389332A0A1B0GUA5 103 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 A0A1B0GV90 55 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RBMY1BA6NDE4 496 aaKnown RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RBMY1EA6NEQ0 496 aaKnown RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 NPIPB7O75200 414 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 GCM2O75603 506 aaPredicted RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RBMY1DP0C7P1 496 aaKnown RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RBMY1A1P0DJD3 496 aaKnown RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RBMY1CP0DJD4 496 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 SRIP30626 198 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF414Q96IQ9 312 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ZSWIM8A7E2V4 1837 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 EFNA4P52798 201 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 FGF12P61328 243 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RPL8P62917 257 aaKnown RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 SAMD13Q5VXD3 122 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF660Q6AZW8 331 aaPredicted RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 MDP1Q86V88 176 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ADAD2Q8NCV1 583 aaKnown RBP5.38□□□□□ -1.55
PTPN3-202ENST00000374541 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 PPP1R3EQ9H7J1 279 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 LINC01549A6NIU2 74 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 MFAP4P55083 255 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 CX3CL1P78423 397 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 Q6ZS92 163 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 OR52M1Q8NGK5 317 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 OR4D5Q8NGN0 318 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 C18orf12Q96KH6 178 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 SSBP3Q9BWW4 388 aaPredicted RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 AICDAQ9GZX7 198 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 SLC25A10Q9UBX3 287 aaPredicted RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 ST6GALNAC2Q9UJ37 374 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 TRBV5-3A0A0A0MS03 114 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 PEX11BO96011 259 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 CEACAM21Q3KPI0 293 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 VN1R4Q7Z5H5 301 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 GATAD1Q8WUU5 269 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 SMIM8Q96KF7 97 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 HDHD3Q9BSH5 251 aaPredicted RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 MRPL16Q9NX20 251 aaKnown RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 TRBV5-5A0A0J9YX44 114 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 J3QW42 95 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 FAM106AQ4KMX7 169 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 C1orf100Q5SVJ3 147 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 FAM27BQ5VT28 67 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 OR5A1Q8NGJ0 315 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 C5orf30Q96GV9 206 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 AKIRIN1Q9H9L7 192 aaPredicted RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 DNAJC4Q9NNZ3 241 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 DOCK8Q8NF50 2099 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 CELSR3Q9NYQ7 3312 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 SPTAN1Q13813 2472 aaKnown RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 DANCRP0C864 163 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 CXCL2P19875 107 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 PI4KAP42356 2102 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 UCP3P55916 312 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 SPSB2Q99619 263 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 GGACTQ9BVM4 153 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 PRSS22Q9GZN4 317 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 FLRT3Q9NZU0 649 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 IGKV3-7A0A075B6H7 116 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 LOC390937A0A1W2PQ73 354 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 PGPA6NDG6 321 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 TMEM229AB2RXF0 380 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 HKR1P10072 659 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 HSPE1P61604 102 aaKnown RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 TIMM23BQ5SRD1 257 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 TMEM91Q6ZNR0 172 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 RGP1Q92546 391 aaPredicted RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 TMEM101Q96IK0 257 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 LINC00470Q9BZP3 86 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 CUL9Q8IWT3 2517 aa5.37□□□□□ -1.55
PTPN3-202ENST00000374541 C8orf82Q6P1X6 216 aaPredicted RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 CARHSP1Q9Y2V2 147 aaKnown RBP5.37□□□□□ -1.55
PTPN3-202ENST00000374541 ZFHX4Q86UP3 3567 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 RPL31P62899 125 aaKnown RBP5.36□□□□□ -1.55
PTPN3-202ENST00000374541 EIF4EBP2Q13542 120 aaPredicted RBP5.36□□□□□ -1.55
PTPN3-202ENST00000374541 LINC01559Q495D7 138 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 OR51G1Q8NGK1 321 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 NUDT11Q96G61 164 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 ARID1BQ8NFD5 2236 aaPredicted RBP5.36□□□□□ -1.55
PTPN3-202ENST00000374541 DPRXA6NFQ7 191 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 RCC1P18754 421 aaPredicted RBP5.36□□□□□ -1.55
PTPN3-202ENST00000374541 HOXA5P20719 270 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 CR1LQ2VPA4 569 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 PRSS27Q9BQR3 290 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 WNT5BQ9H1J7 359 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 IL36RNQ9UBH0 155 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 JPT1Q9UK76 154 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 EIF3GO75821 320 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPN3-202ENST00000374541 HLA-DQB1P01920 261 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 HIST2H2BCQ6DN03 193 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 WFDC3Q8IUB2 231 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 FAM216AQ8WUB2 273 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 C2orf88Q9BSF0 95 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 THSD7BQ9C0I4 1608 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 243.3 ms