RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TMEM231Q9H6L2 316 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 OR51B2Q9Y5P1 312 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 ANKHD1Q8IWZ3 2542 aaKnown RBP10.16□□□□□ -0.78
PRPF4-202ENST00000374199 CEBPZOSA8MTT3 80 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 BUB1B-PAK6H3BSN5 160 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
PRPF4-202ENST00000374199 OPRK1P41145 380 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 ZNF616Q08AN1 781 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 POLR3KQ9Y2Y1 108 aaPredicted RBP10.16□□□□□ -0.78
PRPF4-202ENST00000374199 WASHC3Q9Y3C0 194 aa10.16□□□□□ -0.78
PRPF4-202ENST00000374199 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 C22orf46C9J442 243 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.78
PRPF4-202ENST00000374199 RAB13P51153 203 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 OR8B3Q8NGG8 313 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 OR8B2Q96RD0 313 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 RNF5Q99942 180 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 SNAPINO95295 136 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 USF1P22415 310 aaPredicted RBP10.15□□□□□ -0.78
PRPF4-202ENST00000374199 CD1BP29016 333 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 ARSJQ5FYB0 599 aaPredicted RBP10.15□□□□□ -0.78
PRPF4-202ENST00000374199 FBXO7Q9Y3I1 522 aa10.15□□□□□ -0.78
PRPF4-202ENST00000374199 PCP4L1A6NKN8 68 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 F8W036 122 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 APOA2P02652 100 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 FAM122CQ6P4D5 195 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 H1FXQ92522 213 aaKnown RBP10.14□□□□□ -0.79
PRPF4-202ENST00000374199 PRH1P02810 166 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 MAS1LP35410 378 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 LGALS7P47929 136 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 OR8G2PQ6IF36 304 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 PNKDQ8N490 385 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 SLC24A4Q8NFF2 622 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 VSTM2AQ8TAG5 236 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 LHX4Q969G2 390 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 YPEL4Q96NS1 127 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 P2RX4Q99571 388 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 MGST2Q99735 147 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 TREM1Q9NP99 234 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 YLPM1P49750 1951 aaKnown RBP10.14□□□□□ -0.79
PRPF4-202ENST00000374199 CFAP46Q8IYW2 2715 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 NPBWR1P48145 328 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 SSX9Q7RTT3 188 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 CLRN3Q8NCR9 226 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 RARRES2Q99969 163 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 TUBA4BQ9H853 241 aa10.14□□□□□ -0.79
PRPF4-202ENST00000374199 PCNX1Q96RV3 2341 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PPIAL4CA0A0B4J2A2 164 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 A0A1W2PPI3 338 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 FAM74A7A6NL05 159 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 YIF1AO95070 293 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 IFNA17P01571 189 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 LIPFP07098 398 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PPIAL4GP0DN37 164 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PRR20EP86478 221 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PRR20CP86479 221 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PRR20DP86480 221 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PRR20BP86481 221 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PRR20AP86496 221 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 FAM74A3Q4VXF1 159 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 LDLRAD2Q5SZI1 272 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 FLYWCH2Q96CP2 140 aaKnown RBP10.13□□□□□ -0.79
PRPF4-202ENST00000374199 FGF7P21781 194 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 IL3RAP26951 378 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 SPINK9Q5DT21 86 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 OR10X1Q8NGY0 326 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 GGTLC1Q9BX51 225 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 PKD1L2Q7Z442 2459 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 ARID1AO14497 2285 aa10.13□□□□□ -0.79
PRPF4-202ENST00000374199 CTXND1A0A1B0GTU2 59 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 CA2P00918 260 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 PRRX1P54821 245 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 RAB2AP61019 212 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
PRPF4-202ENST00000374199 CFHR4Q92496 578 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 NPY1RP25929 384 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 ETV3LQ6ZN32 361 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 RITA1Q96K30 269 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 HARBI1Q96MB7 349 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 IGHV1-3A0A0C4DH29 117 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 AGPAT2O15120 278 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 BCL2P10415 239 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 PAX1P15863 534 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 RAB11AP62491 216 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
PRPF4-202ENST00000374199 E7EUB6 86 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 C17orf112F2Z3M2 114 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 MYOD1P15172 320 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 GPX4P36969 197 aaPredicted RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 TAGLN2P37802 199 aaKnown RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 RPL29P47914 159 aaKnown RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 EFNA4P52798 201 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 FAM90A2PQ658T7 463 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 TIMD4Q96H15 378 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 AMMECR1Q9Y4X0 333 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms