RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CDX1P47902 265 aaPredicted RBP12.47□□□□□ -0.41
HDHD3-202ENST00000374180 IFITM3Q01628 133 aa12.47□□□□□ -0.41
HDHD3-202ENST00000374180 ZNF695Q8IW36 515 aa12.47□□□□□ -0.41
HDHD3-202ENST00000374180 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
HDHD3-202ENST00000374180 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 H0Y980 276 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 UPK2O00526 184 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 IL6RP08887 468 aaPredicted RBP12.46□□□□□ -0.41
HDHD3-202ENST00000374180 HLA-GP17693 338 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 SLC6A1P30531 599 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 G6PCP35575 357 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 C18orf65Q6ZTR6 163 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 CASTOR1Q8WTX7 329 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
HDHD3-202ENST00000374180 ZNF355PQ9NSJ1 428 aa12.46□□□□□ -0.41
HDHD3-202ENST00000374180 TRAV3A0A0B4J244 114 aa12.46□□□□□ -0.42
HDHD3-202ENST00000374180 TEX13DA0A0J9YY54 714 aaPredicted RBP12.46□□□□□ -0.42
HDHD3-202ENST00000374180 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.42
HDHD3-202ENST00000374180 SP6Q3SY56 376 aa12.46□□□□□ -0.42
HDHD3-202ENST00000374180 ASPHD1Q5U4P2 390 aa12.46□□□□□ -0.42
HDHD3-202ENST00000374180 CADM3Q8N126 398 aa12.46□□□□□ -0.42
HDHD3-202ENST00000374180 MS4A10Q96PG2 267 aa12.46□□□□□ -0.42
HDHD3-202ENST00000374180 FYTTD1Q96QD9 318 aaKnown RBP12.46□□□□□ -0.42
HDHD3-202ENST00000374180 NEURL2Q9BR09 285 aa12.46□□□□□ -0.42
HDHD3-202ENST00000374180 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 B3GALNT1O75752 331 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 SNAPC5O75971 98 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 PF4P02776 101 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
HDHD3-202ENST00000374180 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 MYOZ3Q8TDC0 251 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 SEC22AQ96IW7 307 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 COMMD5Q9GZQ3 224 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 VSIG4Q9Y279 399 aa12.45□□□□□ -0.42
HDHD3-202ENST00000374180 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 LINC00854A0A1B0GVQ3 168 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 E7EUB6 86 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 IGKV1-39P01597 117 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 IGKV1D-39P04432 117 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 FGF2P09038 288 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 IL7P13232 177 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 MYOD1P15172 320 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 TPPP2P59282 170 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 H2BFWTQ7Z2G1 175 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 SLA2Q9H6Q3 261 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 COA4Q9NYJ1 87 aa12.44□□□□□ -0.42
HDHD3-202ENST00000374180 HMX3A6NHT5 357 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 H3BUA1 57 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 ATG12O94817 140 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 TRGV3P03979 118 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 SLC25A42Q86VD7 318 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 SGPP2Q8IWX5 399 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 ZBTB8BQ8NAP8 495 aaPredicted RBP12.43□□□□□ -0.42
HDHD3-202ENST00000374180 ADAD2Q8NCV1 583 aaKnown RBP12.43□□□□□ -0.42
HDHD3-202ENST00000374180 C4orf3Q8WVX3 66 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
HDHD3-202ENST00000374180 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 KCNIP3Q9Y2W7 256 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 NSG2Q9Y328 171 aa12.43□□□□□ -0.42
HDHD3-202ENST00000374180 NAP1L6A6NFF2 107 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 CENPXA8MT69 81 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 TEX22C9J3V5 150 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 AKR1C4P17516 323 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 UCP1P25874 307 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 OR2B8PP59922 312 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 TTC9CQ8N5M4 171 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 OR5B12Q96R08 314 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 GNB4Q9HAV0 340 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 PRNDQ9UKY0 176 aa12.42□□□□□ -0.42
HDHD3-202ENST00000374180 TEX50A0A1B0GTY4 177 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 A0A1B0GW64 132 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 CCL24O00175 119 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 BRI3O95415 125 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 MYCNOSP40205 109 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 AKR1C2P52895 323 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 DHODHQ02127 395 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 DEFB136Q30KP8 78 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 TMED4Q7Z7H5 227 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 OR1L8Q8NGR8 309 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 OR4A16Q8NH70 328 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 DUX3Q96PT4 197 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 QTRT1Q9BXR0 403 aaKnown RBP12.41□□□□□ -0.42
HDHD3-202ENST00000374180 OR51B2Q9Y5P1 312 aa12.41□□□□□ -0.42
HDHD3-202ENST00000374180 A0A0G2JLM5 398 aa12.4□□□□□ -0.42
HDHD3-202ENST00000374180 CGB1A6NKQ9 187 aa12.4□□□□□ -0.42
HDHD3-202ENST00000374180 CDS2O95674 445 aa12.4□□□□□ -0.42
HDHD3-202ENST00000374180 TRAPPC2P0DI81 140 aa12.4□□□□□ -0.42
HDHD3-202ENST00000374180 TRAPPC2BP0DI82 140 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms