RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 HINT2Q9BX68 163 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 OR13C7P0DN81 318 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 PDPNQ86YL7 162 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 SLC24A4Q8NFF2 622 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 LHX4Q969G2 390 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 FLYWCH2Q96CP2 140 aaKnown RBP15.9■□□□□ 0.14
HDAC1-201ENST00000373548 NEIL1Q96FI4 390 aaPredicted RBP15.9■□□□□ 0.14
HDAC1-201ENST00000373548 ENY2Q9NPA8 101 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 MIOXQ9UGB7 285 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 DCHS2Q6V1P9 2916 aa15.9■□□□□ 0.14
HDAC1-201ENST00000373548 NPY1RP25929 384 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 FGF8P55075 233 aaPredicted RBP15.89■□□□□ 0.13
HDAC1-201ENST00000373548 RAB11AP62491 216 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 PRCDQ00LT1 54 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 FFAR4Q5NUL3 377 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 TGIF2LXQ8IUE1 241 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 CBLN2Q8IUK8 224 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 ZNF709Q8N972 641 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 C8orf46Q8TAG6 207 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 GGACTQ9BVM4 153 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 IGHV2-26A0A0B4J1V2 119 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 PPIAL4CA0A0B4J2A2 164 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 TEX50A0A1B0GTY4 177 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 MAP1LC3B2A6NCE7 125 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 EIF3GO75821 320 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDAC1-201ENST00000373548 OPN1MWP04001 364 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 IFNA4P05014 189 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 PPIAL4GP0DN37 164 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 OPN1MW2P0DN77 364 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 OPN1MW3P0DN78 364 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 AGAP20933 346 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 DLK1P80370 383 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 RAB1CQ92928 201 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 MAP1LC3BQ9GZQ8 125 aa15.89■□□□□ 0.13
HDAC1-201ENST00000373548 USP24Q9UPU5 2620 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 CA2P00918 260 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 SRP19P09132 144 aaKnown RBP15.88■□□□□ 0.13
HDAC1-201ENST00000373548 PRB3Q04118 309 aaPredicted RBP15.88■□□□□ 0.13
HDAC1-201ENST00000373548 TREML4Q6UXN2 200 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 OR4C13Q8NGP0 309 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 RXFP4Q8TDU9 374 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 TIMD4Q96H15 378 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 PCGF1Q9BSM1 259 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 PLEKHA3Q9HB20 300 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 GNG13Q9P2W3 67 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 WASHC3Q9Y3C0 194 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 LOC102723971A0A1B0GUV8 181 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 SMCO3A2RU48 225 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 C17orf112F2Z3M2 114 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 IGLV1-47P01700 117 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 IL3RAP26951 378 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 TNFRSF14Q92956 283 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 FKBP11Q9NYL4 201 aa15.88■□□□□ 0.13
HDAC1-201ENST00000373548 A0A1W2PPH5 198 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 MBP02144 154 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 RBP4P02753 201 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 HSPB1P04792 205 aaKnown RBP15.87■□□□□ 0.13
HDAC1-201ENST00000373548 KHDC3LQ587J8 217 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 OR10G4Q8NGN3 311 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 OR10G9Q8NGN4 311 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 OR10G7Q8NGN6 311 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 OR5B3Q8NH48 314 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 SLC39A9Q9NUM3 307 aa15.87■□□□□ 0.13
HDAC1-201ENST00000373548 EPG5Q9HCE0 2579 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 C22orf46C9J442 243 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 C19orf84I3L1E1 186 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 IGLV2-23P01705 113 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 HLA-DRB5Q30154 266 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 SOHLH1Q5JUK2 328 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 LY6G5BQ8NDX9 201 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 SLC25A22Q9H936 323 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 CACNA1BQ00975 2339 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 FBP1P09467 338 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 RAB13P51153 203 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 CLEC7AQ9BXN2 247 aa15.86■□□□□ 0.13
HDAC1-201ENST00000373548 CTXND1A0A1B0GTU2 59 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 ZFP92A6NM28 416 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 MPDU1O75352 247 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 BCL2P10415 239 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 PRRX1P54821 245 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 RPL8P62917 257 aaKnown RBP15.85■□□□□ 0.13
HDAC1-201ENST00000373548 ARSJQ5FYB0 599 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-201ENST00000373548 TMEM167AQ8TBQ9 72 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 CHODLQ9H9P2 273 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 USF1P22415 310 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-201ENST00000373548 MC5RP33032 325 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 AWAT1Q58HT5 328 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 C1orf159Q96HA4 380 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 MGST2Q99735 147 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 ARHGAP32A7KAX9 2087 aa15.85■□□□□ 0.13
HDAC1-201ENST00000373548 HMGB3O15347 200 aaKnown RBP15.84■□□□□ 0.13
HDAC1-201ENST00000373548 LIPFP07098 398 aa15.84■□□□□ 0.13
HDAC1-201ENST00000373548 AKIRIN2Q53H80 203 aa15.84■□□□□ 0.13
HDAC1-201ENST00000373548 FAM122CQ6P4D5 195 aa15.84■□□□□ 0.13
HDAC1-201ENST00000373548 CYB561D1Q8N8Q1 229 aa15.84■□□□□ 0.13
HDAC1-201ENST00000373548 BEND2Q8NDZ0 799 aa15.84■□□□□ 0.13
HDAC1-201ENST00000373548 OR4A5Q8NH83 315 aa15.84■□□□□ 0.13
HDAC1-201ENST00000373548 PATZ1Q9HBE1 687 aaKnown RBP15.84■□□□□ 0.13
HDAC1-201ENST00000373548 IGHV3-72A0A0B4J1Y9 119 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 COX7A1P24310 79 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms