RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 MEGF9Q9H1U4 602 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 ELOVL5Q9NYP7 299 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 OR51G1Q8NGK1 321 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 OR13C6PQ8NH95 151 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 MSGN1A6NI15 193 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 ECSCRQ19T08 205 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 TMEM95Q3KNT9 176 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 CHCHD2Q9Y6H1 151 aaPredicted RBP12.08□□□□□ -0.48
LMX1B-202ENST00000373474 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 H3BUT2 72 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 LYPD3O95274 346 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 LOXL3P58215 753 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 CDCP2Q5VXM1 449 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 RNF222A6NCQ9 220 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 J3QW42 95 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 TIAF1O95411 115 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 GCHFRP30047 84 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 CENPWQ5EE01 88 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 MBNL2Q5VZF2 373 aaKnown RBP12.08□□□□□ -0.48
LMX1B-202ENST00000373474 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 WFDC3Q8IUB2 231 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 TRBV20OR9-2A0A075B6H5 130 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
LMX1B-202ENST00000373474 hCG_38984A0A1B0GV85 526 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 ZNF146Q15072 292 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 TMEM30BQ3MIR4 351 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 LOXL4Q96JB6 756 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 IFNL4K9M1U5 179 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 SIP14410 1827 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 TIMM23BQ5SRD1 257 aa12.07□□□□□ -0.48
LMX1B-202ENST00000373474 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 RAMP1O60894 148 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 CKS1BP61024 79 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 PGPEP1LA6NFU8 196 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 MYO7AQ13402 2215 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 A0A1B0GTI1 187 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 HCP5Q6MZN7 132 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 KLK15Q9H2R5 256 aa12.06□□□□□ -0.48
LMX1B-202ENST00000373474 RBMY1BA6NDE4 496 aaKnown RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 RBMY1EA6NEQ0 496 aaKnown RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 RBMY1DP0C7P1 496 aaKnown RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 SLC25A53Q5H9E4 307 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 Q6AWC8 147 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 FADS6Q8N9I5 356 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 DDB2Q92466 427 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 TSPOP30536 169 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 MFAP4P55083 255 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 CYSLTR1Q9Y271 337 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 H3BRM9 83 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 RND2P52198 227 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 ZNF324BQ6AW86 544 aaPredicted RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 GATAD1Q8WUU5 269 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 IGHV3-72A0A0B4J1Y9 119 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 PLAUP00749 431 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
LMX1B-202ENST00000373474 UBE2CO00762 179 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 SLC25A28Q96A46 364 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
LMX1B-202ENST00000373474 SNRPCP09234 159 aaKnown RBP12.04□□□□□ -0.48
LMX1B-202ENST00000373474 CTSSP25774 331 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 ST6GALNAC3Q8NDV1 305 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 CHD5Q8TDI0 1954 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 NKX2-8O15522 239 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 SUMO2P61956 95 aaKnown RBP12.04□□□□□ -0.48
LMX1B-202ENST00000373474 ABHD12Q8N2K0 398 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 SPANXA1Q9NS26 97 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 RIPPLY3P57055 190 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 OR2K2Q8NGT1 345 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 NABP2Q9BQ15 211 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 NPCDR1Q9BY65 106 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 H7C1H1 209 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 NPFFO15130 113 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 LINC00614P0C842 121 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 SEC11AP67812 179 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 TBR1Q16650 682 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 ZFAND6Q6FIF0 208 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 VKORC1L1Q8N0U8 176 aa12.04□□□□□ -0.48
LMX1B-202ENST00000373474 LDLRAD4O15165 306 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 LDLRAD2Q5SZI1 272 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 LEAP2Q969E1 77 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
LMX1B-202ENST00000373474 HILPDAQ9Y5L2 63 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 NDUFA2O43678 99 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 CACNG7P62955 275 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 NRN1LQ496H8 165 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 PPP1R32Q7Z5V6 425 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 C2orf88Q9BSF0 95 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms