RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ASCL3Q9NQ33 180 aa5.29□□□□□ -1.56
CHD6-202ENST00000373222 AURKAIP1Q9NWT8 199 aaPredicted RBP5.29□□□□□ -1.56
CHD6-202ENST00000373222 ZNRD1Q9P1U0 126 aa5.29□□□□□ -1.56
CHD6-202ENST00000373222 RNF24Q9Y225 148 aa5.29□□□□□ -1.56
CHD6-202ENST00000373222 NCOR2Q9Y618 2525 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TRAV3A0A0B4J244 114 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 IGHV2OR16-5A0A0B4J2B6 119 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 A0A1B0GW64 132 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TMEM30CPA0ZSE6 113 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 MAP1LC3B2A6NCE7 125 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 PRSS44E7EML9 344 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 PPIHO43447 177 aaKnown RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 TNFSF13O75888 250 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TRGC2P03986 189 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 OR9G9P0C7N8 305 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 MYOD1P15172 320 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 CD200P41217 278 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 ZNF83P51522 516 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TGFBR3Q03167 851 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TLE4Q04727 773 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 LRRC75BQ2VPJ9 315 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 RNF212Q495C1 297 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 SCGB1C1Q8TD33 95 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 LRRC29Q8WV35 223 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TAF15Q92804 592 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHD6-202ENST00000373222 LSM10Q969L4 123 aaKnown RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 AGMATQ9BSE5 352 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 MAP1LC3BQ9GZQ8 125 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TUBA4BQ9H853 241 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 NIT2Q9NQR4 276 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 YAE1D1Q9NRH1 226 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 AKAP6Q13023 2319 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 IGKV1D-17A0A075B6S4 117 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 PMS2P5A8MQ11 134 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 SLC31A2O15432 143 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 HSPB1P04792 205 aaKnown RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 P0C879 139 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 BCL2P10415 239 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 NDUFA6P56556 154 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 CD81P60033 236 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 MRPL49Q13405 166 aaKnown RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 KIAA0141Q14154 515 aaPredicted RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 PRSS8Q16651 343 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 PDLIM3Q53GG5 364 aaPredicted RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 RPUSD4Q96CM3 377 aaKnown RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 STARD4Q96DR4 205 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 AJUBAQ96IF1 538 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 NIPSNAP3BQ9BS92 247 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 TMEM204Q9BSN7 226 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 QTRT1Q9BXR0 403 aaKnown RBP5.28□□□□□ -1.56
CHD6-202ENST00000373222 ONECUT1Q9UBC0 465 aa5.28□□□□□ -1.56
CHD6-202ENST00000373222 PTPRQQ9UMZ3 2332 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 SPTBN1Q01082 2364 aaKnown RBP5.27□□□□□ -1.57
CHD6-202ENST00000373222 ARHGAP32A7KAX9 2087 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 LRRC30A6NM36 301 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BKO60814 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 DFFBO76075 338 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 IGHG3P01860 377 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 IFNA4P05014 189 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BJP06899 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 COX5AP20674 150 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BOP23527 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BBP33778 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BDP58876 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BCP62807 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 SLAQ13239 276 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST2H2BEQ16778 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 ACSF3Q4G176 576 aaPredicted RBP5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.27□□□□□ -1.57
CHD6-202ENST00000373222 SERTAD4-AS1Q5TG53 156 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 TMEM14EPQ6UXP3 125 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 MOB1BQ7L9L4 216 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 Q8IYB0 196 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 OR5T1Q8NG75 326 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 OR51G1Q8NGK1 321 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 EDARADDQ8WWZ3 215 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BHQ93079 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 TVP23CQ96ET8 276 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BNQ99877 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 HIST1H2BMQ99879 126 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 ELOVL1Q9BW60 279 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 GSN-AS1Q9NRJ2 163 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 KCNIP1Q9NZI2 227 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 DOK5Q9P104 306 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 COL6A6A6NMZ7 2263 aa5.27□□□□□ -1.57
CHD6-202ENST00000373222 TRAV38-1A0A0B4J264 116 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 MARCH11A6NNE9 402 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 C15orf65H3BRN8 121 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 AP4M1O00189 453 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 FCGR3BO75015 233 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 ZNF737O75373 536 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 SOD3P08294 240 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 SLC25A6P12236 298 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 FGF7P21781 194 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 EDDM3BP56851 147 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 KHDC3LQ587J8 217 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 HIST2H2BCQ6DN03 193 aa5.26□□□□□ -1.57
CHD6-202ENST00000373222 HIST2H2BDQ6DRA6 164 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms