RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 C1QL4Q86Z23 238 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 C1orf159Q96HA4 380 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 SLC35D1Q9NTN3 355 aa15.33■□□□□ 0.04
USP49-202ENST00000373010 TNCP24821 2201 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 UBE2CO00762 179 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 GGACTQ9BVM4 153 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 GGTLC1Q9BX51 225 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 OR51B2Q9Y5P1 312 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 SHISA9B4DS77 424 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 SEC14L6B5MCN3 397 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 CA2P00918 260 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 NPY1RP25929 384 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 TMPRSS3P57727 454 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 ADIRFQ15847 76 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 TMEM200BQ69YZ2 307 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 SLC24A4Q8NFF2 622 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 H1FXQ92522 213 aaKnown RBP15.32■□□□□ 0.04
USP49-202ENST00000373010 GAL3ST2Q9H3Q3 398 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 ENY2Q9NPA8 101 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 TMEM106BQ9NUM4 274 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 NAT8Q9UHE5 227 aa15.32■□□□□ 0.04
USP49-202ENST00000373010 POLEQ07864 2286 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 E7EQL1 145 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 MPDU1O75352 247 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 KBTBD11O94819 623 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 IGHV2-5P01817 119 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 OPRK1P41145 380 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 POU2AF1Q16633 256 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 TMEM30BQ3MIR4 351 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 ARSJQ5FYB0 599 aaPredicted RBP15.31■□□□□ 0.04
USP49-202ENST00000373010 DMRTC2Q8IXT2 367 aaPredicted RBP15.31■□□□□ 0.04
USP49-202ENST00000373010 C1orf87Q8N0U7 546 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 RNASE6Q93091 150 aaKnown RBP15.31■□□□□ 0.04
USP49-202ENST00000373010 PARLQ9H300 379 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 PXMP4Q9Y6I8 212 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 MEF2CQ06413 473 aaPredicted RBP15.31■□□□□ 0.04
USP49-202ENST00000373010 TMEM241Q24JQ0 296 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 CYP2G1PQ6ZSU1 146 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 SSMEM1Q8WWF3 244 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 ZNF714Q96N38 554 aa15.31■□□□□ 0.04
USP49-202ENST00000373010 TMEM250H0YL14 139 aa15.3■□□□□ 0.04
USP49-202ENST00000373010 RTL8BQ17RB0 113 aa15.3■□□□□ 0.04
USP49-202ENST00000373010 MRPL20Q9BYC9 149 aaKnown RBP15.3■□□□□ 0.04
USP49-202ENST00000373010 DYNLRB1Q9NP97 96 aa15.3■□□□□ 0.04
USP49-202ENST00000373010 A0A1W2PPV4 95 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 CLDN34H7C241 214 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 UPK2O00526 184 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 IL6RP08887 468 aaPredicted RBP15.29■□□□□ 0.04
USP49-202ENST00000373010 UBE2G2P60604 165 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 RBPJQ06330 500 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 METTL1Q9UBP6 276 aaKnown RBP15.29■□□□□ 0.04
USP49-202ENST00000373010 MEOX2P50222 304 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 KIAA0141Q14154 515 aaPredicted RBP15.29■□□□□ 0.04
USP49-202ENST00000373010 ZNF833PQ6ZTB9 187 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 NPVFQ9HCQ7 196 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 CTSZQ9UBR2 303 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 PRNDQ9UKY0 176 aa15.29■□□□□ 0.04
USP49-202ENST00000373010 LSM4Q9Y4Z0 139 aaKnown RBP15.29■□□□□ 0.04
USP49-202ENST00000373010 VSTM5A8MXK1 200 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 C11orf94C9JXX5 98 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 J3QR06 171 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 AP4M1O00189 453 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 TNFRSF13BO14836 293 aaPredicted RBP15.28■□□□□ 0.04
USP49-202ENST00000373010 COL8A2P25067 703 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 REG1BP48304 166 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 RND2P52198 227 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 NCMAPQ5T1S8 102 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 ARFGEF3Q5TH69 2177 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 NEIL1Q96FI4 390 aaPredicted RBP15.28■□□□□ 0.04
USP49-202ENST00000373010 TMEM242Q9NWH2 141 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 NDUFB3O43676 98 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 NPPCP23582 126 aa15.28■□□□□ 0.04
USP49-202ENST00000373010 RPL23P62829 140 aaKnown RBP15.28■□□□□ 0.04
USP49-202ENST00000373010 SAA1P0DJI8 122 aaPredicted RBP15.27■□□□□ 0.04
USP49-202ENST00000373010 SSX8Q7RTT4 187 aa15.27■□□□□ 0.04
USP49-202ENST00000373010 OR10A7Q8NGE5 316 aa15.27■□□□□ 0.04
USP49-202ENST00000373010 FAM122AQ96E09 287 aa15.27■□□□□ 0.04
USP49-202ENST00000373010 NGBQ9NPG2 151 aa15.27■□□□□ 0.04
USP49-202ENST00000373010 DVL1O14640 695 aa15.27■□□□□ 0.03
USP49-202ENST00000373010 ATP5G3P48201 142 aa15.27■□□□□ 0.03
USP49-202ENST00000373010 BSXQ3C1V8 233 aa15.27■□□□□ 0.03
USP49-202ENST00000373010 RAB1CQ92928 201 aa15.27■□□□□ 0.03
USP49-202ENST00000373010 FAM210BQ96KR6 192 aa15.27■□□□□ 0.03
USP49-202ENST00000373010 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.03
USP49-202ENST00000373010 TEX50A0A1B0GTY4 177 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 ARL14EPLP0DKL9 152 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 PRCDQ00LT1 54 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 DIAPH2-AS1Q14236 149 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 LRRC10Q5BKY1 277 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 CST9LP1Q5W188 147 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 C16orf82Q7Z2V1 217 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 OR51G1Q8NGK1 321 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 ABHD5Q8WTS1 349 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 VKORC1Q9BQB6 163 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 PLAUP00749 431 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 TRGC2P03986 189 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 B2MP61769 119 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 TEPPQ6URK8 271 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 ZNF257Q9Y2Q1 563 aa15.26■□□□□ 0.03
USP49-202ENST00000373010 SOX15O60248 233 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms