RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 EIF4EBP1Q13541 118 aaPredicted RBP11.39□□□□□ -0.59
USP49-201ENST00000373006 ABHD12Q8N2K0 398 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 HEYLQ9NQ87 328 aaPredicted RBP11.39□□□□□ -0.59
USP49-201ENST00000373006 TNRC6BQ9UPQ9 1833 aaKnown RBP11.39□□□□□ -0.59
USP49-201ENST00000373006 CFAP47Q6ZTR5 3102 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 TMEM30CPA0ZSE6 113 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 SNURFLB1AK76 121 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 AMTP48728 403 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 SELENOTP62341 195 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 OR2M7Q8NG81 312 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 LRFN3Q9BTN0 628 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 MS4A5Q9H3V2 200 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 SEPSECSQ9HD40 501 aaKnown RBP11.39□□□□□ -0.59
USP49-201ENST00000373006 PILRBQ9UKJ0 227 aa11.39□□□□□ -0.59
USP49-201ENST00000373006 SMPD2O60906 423 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 FOXH1O75593 365 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 TRIP6Q15654 476 aaKnown RBP11.38□□□□□ -0.59
USP49-201ENST00000373006 SIGLECL1Q8N7X8 197 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 ZBTB34Q8NCN2 500 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 MGST2Q99735 147 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 CADP27708 2225 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 FCGR3BO75015 233 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 Q8IYB0 196 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 FBXL7Q9UJT9 491 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 LOXL2Q9Y4K0 774 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
USP49-201ENST00000373006 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 C1orf185Q5T7R7 199 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 OR8I2Q8N0Y5 310 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 GAL3ST2Q9H3Q3 398 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
USP49-201ENST00000373006 ROS1P08922 2347 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 A8MXE2 369 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 GOSR1O95249 250 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 COMPP49747 757 aaPredicted RBP11.37□□□□□ -0.59
USP49-201ENST00000373006 TCL1AP56279 114 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 RANP62826 216 aaKnown RBP11.37□□□□□ -0.59
USP49-201ENST00000373006 RAB1CQ92928 201 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 COQ2Q96H96 371 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 BDP1A6H8Y1 2624 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 OOEPA6NGQ2 149 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 FOXF2Q12947 444 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 OR13A1Q8NGR1 328 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 GP6Q9HCN6 339 aa11.37□□□□□ -0.59
USP49-201ENST00000373006 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 CXorf1O96002 111 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 OR1C1Q15619 314 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 PRAMEF5Q5TYX0 476 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 PRAMEF6Q5VXH4 476 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 PMS2CLQ68D20 193 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 MMD2Q8IY49 270 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 GNB4Q9HAV0 340 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 ASPHD1Q5U4P2 390 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 WFDC8Q8IUA0 241 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 TMEM105Q8N8V8 129 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 LOXL4Q96JB6 756 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 TAAR6Q96RI8 345 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 FAM173AQ9BQD7 235 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 OPRK1P41145 380 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 HTD2P86397 168 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 TTTY12Q9BZ98 90 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
USP49-201ENST00000373006 PROP1O75360 226 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 ACTL6BO94805 426 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 LGALS4P56470 323 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 PLGLB1Q02325 96 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 EDDM3AQ14507 147 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 OR4A16Q8NH70 328 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 CT55Q8WUE5 264 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 B4GALT7Q9UBV7 327 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 H0Y8G0 127 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 NTN3O00634 580 aaPredicted RBP11.35□□□□□ -0.59
USP49-201ENST00000373006 TDGF1P13385 188 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 GCHFRP30047 84 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 FXYD3Q14802 87 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 DCAF12Q5T6F0 453 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 DOLPP1Q86YN1 238 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 TMEM251Q8N6I4 163 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 RCHY1Q96PM5 261 aa11.35□□□□□ -0.59
USP49-201ENST00000373006 TBL2Q9Y4P3 447 aaKnown RBP11.35□□□□□ -0.59
USP49-201ENST00000373006 GPX1P07203 203 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 RPEL1Q2QD12 228 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 ZNF718Q3SXZ3 478 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 ZNF766Q5HY98 468 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms