RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 TMEM177Q53S58 311 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 OR4X2Q8NGF9 303 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 GRIFINA4D1Z8 144 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 TPTE2P1Q5T6R2 138 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 C1orf162Q8NEQ5 155 aaPredicted RBP8.43□□□□□ -1.06
TRERF1-204ENST00000372922 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
TRERF1-204ENST00000372922 LOC390937A0A1W2PQ73 354 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 TM4SF5O14894 197 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 CDX1P47902 265 aaPredicted RBP8.43□□□□□ -1.06
TRERF1-204ENST00000372922 FUT5Q11128 374 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 C10orf128Q5T292 105 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 RBFOX2O43251 390 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRERF1-204ENST00000372922 AMY1AP04745 511 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 LCN2P80188 198 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF48Q96MX3 618 aaPredicted RBP8.43□□□□□ -1.06
TRERF1-204ENST00000372922 OR5AC2Q9NZP5 309 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 GREM1O60565 184 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 HLA-DQA1P01909 254 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 TCF24Q7RTU0 167 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 AMELYQ99218 206 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
TRERF1-204ENST00000372922 MTCL1Q9Y4B5 1905 aaKnown RBP8.43□□□□□ -1.06
TRERF1-204ENST00000372922 NPIPB13A6NJU9 1138 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 NPIPB4C9JG80 1138 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 Q96M66 194 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 MRPL18Q9H0U6 180 aaKnown RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 UCP3P55916 312 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 IGLV3-21P80748 117 aaPredicted RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 HIST1H1AQ02539 215 aaPredicted RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 TCF19Q9Y242 345 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 TUBGCP6Q96RT7 1819 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 TRBV5-7A0A0A0MS05 114 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 MEF2BQ02080 365 aaPredicted RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 SRSF12Q8WXF0 261 aaKnown RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF703Q9H7S9 590 aaPredicted RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 HSPB1P04792 205 aaKnown RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 VSIG10L2P0DP72 767 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 SPSB4Q96A44 273 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 DPM3Q9P2X0 92 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 DNAJC13O75165 2243 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 ARL14EPLP0DKL9 152 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 P2RY4P51582 365 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF79Q15937 498 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 FAM74A4Q5TZK3 123 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 CTHRC1Q96CG8 243 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 RBBP6Q7Z6E9 1792 aaKnown RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 TIAF1O95411 115 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 PUSL1Q8N0Z8 303 aaKnown RBP8.42□□□□□ -1.06
TRERF1-204ENST00000372922 ABHD17AQ96GS6 310 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 SIGLEC12Q96PQ1 595 aa8.42□□□□□ -1.06
TRERF1-204ENST00000372922 IGKV3OR2-268A0A0C4DH90 116 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 ZG16O60844 167 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 BSPH1Q075Z2 132 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 FAM27E3Q08E93 113 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF815PA8K554 130 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 H3BTX0 84 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 H7C1H1 209 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 CEACAM4O75871 244 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 HLA-DQB1P01920 261 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 MEF2CQ06413 473 aaPredicted RBP8.41□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF362Q5T0B9 420 aaPredicted RBP8.41□□□□□ -1.06
TRERF1-204ENST00000372922 VCX2Q9H322 139 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 IGKV3-20P01619 116 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 FOLR2P14207 255 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 KLK2P20151 261 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 G6PC2Q9NQR9 355 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 RPS11P62280 158 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRERF1-204ENST00000372922 ACP7Q6ZNF0 438 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 CLDND2Q8NHS1 167 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 COL11A2P13942 1736 aaPredicted RBP8.41□□□□□ -1.06
TRERF1-204ENST00000372922 STRCP1A6NGW2 1772 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 BIVMQ86UB2 503 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF114Q8NC26 417 aa8.41□□□□□ -1.06
TRERF1-204ENST00000372922 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.06
TRERF1-204ENST00000372922 PQLC2LA1A4F0 135 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 LEPROTL1O95214 131 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 HIST1H4AP62805 103 aaKnown RBP8.4□□□□□ -1.06
TRERF1-204ENST00000372922 GAGE2BQ13066 116 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 VKORC1L1Q8N0U8 176 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 NPIPB9F8W1W9 429 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 NPIPB7O75200 414 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 PEMTQ9UBM1 199 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 CD69Q07108 199 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
TRERF1-204ENST00000372922 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.4□□□□□ -1.06
TRERF1-204ENST00000372922 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 NRIP2Q9BQI9 281 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 LY75O60449 1722 aa8.4□□□□□ -1.06
TRERF1-204ENST00000372922 CTSBP07858 339 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms