RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PRRX1P54821 245 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 RAB5BP61020 215 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 DIAPH2-AS1Q14236 149 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 RHEBQ15382 184 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 VWC2Q2TAL6 325 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 LHX4Q969G2 390 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 HIST1H2BAQ96A08 127 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 ENY2Q9NPA8 101 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 TIMM9Q9Y5J7 89 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 C7orf77A4D0Y5 90 aa20.31■□□□□ 0.84
CTSA-203ENST00000372459 IFNA4P05014 189 aa20.31■□□□□ 0.84
CTSA-203ENST00000372459 OR4C13Q8NGP0 309 aa20.31■□□□□ 0.84
CTSA-203ENST00000372459 ZNF257Q9Y2Q1 563 aa20.31■□□□□ 0.84
CTSA-203ENST00000372459 TET2Q6N021 2002 aaPredicted RBP20.31■□□□□ 0.84
CTSA-203ENST00000372459 LIPFP07098 398 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 SAA1P0DJI8 122 aaPredicted RBP20.3■□□□□ 0.84
CTSA-203ENST00000372459 CDKN1AP38936 164 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 LY6G5BQ8NDX9 201 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 PATZ1Q9HBE1 687 aaKnown RBP20.3■□□□□ 0.84
CTSA-203ENST00000372459 FKBP11Q9NYL4 201 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 MALRD1Q5VYJ5 2156 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 A6NNC1 897 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 MT-ND4LP03901 98 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 AKIRIN2Q53H80 203 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 CLEC7AQ9BXN2 247 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 WASHC3Q9Y3C0 194 aa20.3■□□□□ 0.84
CTSA-203ENST00000372459 KBTBD11O94819 623 aa20.29■□□□□ 0.84
CTSA-203ENST00000372459 SNRNP70P08621 437 aaKnown RBP20.29■□□□□ 0.84
CTSA-203ENST00000372459 AKR1D1P51857 326 aa20.29■□□□□ 0.84
CTSA-203ENST00000372459 HABP2Q14520 560 aaPredicted RBP20.29■□□□□ 0.84
CTSA-203ENST00000372459 HLA-DRB5Q30154 266 aa20.29■□□□□ 0.84
CTSA-203ENST00000372459 LRBAP50851 2863 aa20.29■□□□□ 0.84
CTSA-203ENST00000372459 A0A1B0GV50 99 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 ZNF98A6NK75 572 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 M0R036 132 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 FGF7P21781 194 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 MC5RP33032 325 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 RPL35P42766 123 aaKnown RBP20.28■□□□□ 0.84
CTSA-203ENST00000372459 RAB2AP61019 212 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 RAB11AP62491 216 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 SPSB3Q6PJ21 355 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 CENPVQ7Z7K6 275 aaPredicted RBP20.28■□□□□ 0.84
CTSA-203ENST00000372459 HRNRQ86YZ3 2850 aaPredicted RBP20.28■□□□□ 0.84
CTSA-203ENST00000372459 IGLV1-47P01700 117 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 HBE1P02100 147 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 BEND2Q8NDZ0 799 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 RPRMQ9NS64 109 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 KIAA1456Q9P272 454 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 ONECUT1Q9UBC0 465 aa20.28■□□□□ 0.84
CTSA-203ENST00000372459 C1orf196B1AJZ1 125 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 C22orf46C9J442 243 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 RRHO14718 337 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 AKR1C3P42330 323 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 GPR6P46095 362 aaPredicted RBP20.27■□□□□ 0.84
CTSA-203ENST00000372459 C2CD4CQ8TF44 421 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 SFT2D1Q8WV19 159 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 GGACTQ9BVM4 153 aa20.27■□□□□ 0.84
CTSA-203ENST00000372459 SSBP3Q9BWW4 388 aaPredicted RBP20.27■□□□□ 0.84
CTSA-203ENST00000372459 PRCDQ00LT1 54 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 TMEM41BQ5BJD5 291 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 SP5Q6BEB4 398 aaPredicted RBP20.26■□□□□ 0.83
CTSA-203ENST00000372459 OR5B3Q8NH48 314 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 VSTM2AQ8TAG5 236 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 ACACBO00763 2458 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 DLX1P56177 255 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 ZFP82Q8N141 532 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 SLC24A4Q8NFF2 622 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 OR4A5Q8NH83 315 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 HINT2Q9BX68 163 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 VSIRQ9H7M9 311 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 UNKLQ9H9P5 680 aaKnown RBP20.26■□□□□ 0.83
CTSA-203ENST00000372459 PLEKHA3Q9HB20 300 aa20.26■□□□□ 0.83
CTSA-203ENST00000372459 RBFOX3A6NFN3 312 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 MYOD1P15172 320 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 MDKP21741 143 aaPredicted RBP20.25■□□□□ 0.83
CTSA-203ENST00000372459 CD1BP29016 333 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 EFNA4P52798 201 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 BUB1B-PAK6H3BSN5 160 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 NPY1RP25929 384 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 ELLP55199 621 aaPredicted RBP20.25■□□□□ 0.83
CTSA-203ENST00000372459 CCL20P78556 96 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 ZNF709Q8N972 641 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 TMEM170AQ8WVE7 144 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 NPCDR1Q9BY65 106 aa20.25■□□□□ 0.83
CTSA-203ENST00000372459 AMMECR1Q9Y4X0 333 aaPredicted RBP20.25■□□□□ 0.83
CTSA-203ENST00000372459 LOC105371242A0A075B767 164 aa20.24■□□□□ 0.83
CTSA-203ENST00000372459 TEX50A0A1B0GTY4 177 aa20.24■□□□□ 0.83
CTSA-203ENST00000372459 C17orf112F2Z3M2 114 aa20.24■□□□□ 0.83
CTSA-203ENST00000372459 USF1P22415 310 aaPredicted RBP20.24■□□□□ 0.83
CTSA-203ENST00000372459 COX7A1P24310 79 aa20.24■□□□□ 0.83
CTSA-203ENST00000372459 SOHLH1Q5JUK2 328 aa20.24■□□□□ 0.83
CTSA-203ENST00000372459 TRAV1-1A0A0B4J248 108 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 PRSS46E5RG02 174 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 NDUFS7O75251 213 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 OR13C7P0DN81 318 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 WDR83OSQ9Y284 106 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 RPL8P62917 257 aaKnown RBP20.23■□□□□ 0.83
CTSA-203ENST00000372459 DLK1P80370 383 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 PRB3Q04118 309 aaPredicted RBP20.23■□□□□ 0.83
CTSA-203ENST00000372459 HNF4GQ14541 408 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms