RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ESM1Q9NQ30 184 aa12.58□□□□□ -0.4
TMEM53-204ENST00000372243 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
TMEM53-204ENST00000372243 FCN1O00602 326 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 RBMXL2O75526 392 aaKnown RBP12.57□□□□□ -0.4
TMEM53-204ENST00000372243 ACTL6BO94805 426 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 SIX6O95475 246 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 CA2P00918 260 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 RPL15P61313 204 aaKnown RBP12.57□□□□□ -0.4
TMEM53-204ENST00000372243 IL15RAQ13261 267 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-204ENST00000372243 OR1S1Q8NH92 325 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 PDCD10Q9BUL8 212 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 ZNF436Q9C0F3 470 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-204ENST00000372243 COMMD5Q9GZQ3 224 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 TNFRSF19Q9NS68 423 aa12.57□□□□□ -0.4
TMEM53-204ENST00000372243 GPR137BO60478 399 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 RNASE1P07998 156 aaKnown RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 COMPP49747 757 aaPredicted RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 OR2B8PP59922 312 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 HSPE1P61604 102 aaKnown RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 QTRT1Q9BXR0 403 aaKnown RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 HSPB7Q9UBY9 170 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 OR51B2Q9Y5P1 312 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 ST8SIA3O43173 380 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 GIPP09681 153 aaPredicted RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 NKX2-1P43699 371 aaPredicted RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 CX3CL1P78423 397 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 SSBP2P81877 361 aaPredicted RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 ID3Q02535 119 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 TNXAQ16473 311 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 FYTTD1Q96QD9 318 aaKnown RBP12.56□□□□□ -0.4
TMEM53-204ENST00000372243 GSKIPQ9P0R6 139 aa12.56□□□□□ -0.4
TMEM53-204ENST00000372243 TNCP24821 2201 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 IGHV7-81A0A0B4J1V7 117 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 TCF21O43680 179 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 SPCS3P61009 180 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 NPFFR1Q9GZQ6 430 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 ZFP57Q9NU63 452 aa12.55□□□□□ -0.4
TMEM53-204ENST00000372243 KCNAB3O43448 404 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 IFNA17P01571 189 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 IGHG2P01859 326 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
TMEM53-204ENST00000372243 RAP2BP61225 183 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 BLCAPP62952 87 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 UBA52P62987 128 aaKnown RBP12.54□□□□□ -0.4
TMEM53-204ENST00000372243 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 FXYD3Q14802 87 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 CXorf66Q5JRM2 361 aaPredicted RBP12.54□□□□□ -0.4
TMEM53-204ENST00000372243 SRSF12Q8WXF0 261 aaKnown RBP12.54□□□□□ -0.4
TMEM53-204ENST00000372243 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 NDUFA4L2Q9NRX3 87 aa12.54□□□□□ -0.4
TMEM53-204ENST00000372243 TRIM77I1YAP6 450 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 MED6O75586 246 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 CNIH1O95406 144 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 MYOD1P15172 320 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 GNB1P62873 340 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
TMEM53-204ENST00000372243 PRSS22Q9GZN4 317 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
TMEM53-204ENST00000372243 CUBNO60494 3623 aa12.53□□□□□ -0.4
TMEM53-204ENST00000372243 CGB1A6NKQ9 187 aa12.52□□□□□ -0.4
TMEM53-204ENST00000372243 E7EUB6 86 aa12.52□□□□□ -0.4
TMEM53-204ENST00000372243 INS-IGF2F8WCM5 200 aa12.52□□□□□ -0.4
TMEM53-204ENST00000372243 MBPP02686 304 aaPredicted RBP12.52□□□□□ -0.4
TMEM53-204ENST00000372243 C10orf55Q5SWW7 151 aa12.52□□□□□ -0.4
TMEM53-204ENST00000372243 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.4
TMEM53-204ENST00000372243 PPP1R1CQ8WVI7 109 aa12.52□□□□□ -0.4
TMEM53-204ENST00000372243 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.4
TMEM53-204ENST00000372243 A0A1W2PN81 502 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 SH2D7A6NKC9 451 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-204ENST00000372243 SYNGR2O43760 224 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 CCNKO75909 580 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 LY86O95711 162 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 SCGB1D2O95969 90 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 OPN1MWP04001 364 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 IGF1P05019 195 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 OPN1MW2P0DN77 364 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 OPN1MW3P0DN78 364 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 CHRNA7P36544 502 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-204ENST00000372243 NDPQ00604 133 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 CD83Q01151 205 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 RAB32Q13637 225 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 Q8N2B8 174 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 ZNF580Q9UK33 172 aa12.52□□□□□ -0.41
TMEM53-204ENST00000372243 PLXNB1O43157 2135 aa12.51□□□□□ -0.41
TMEM53-204ENST00000372243 A0A1B0GW64 132 aa12.51□□□□□ -0.41
TMEM53-204ENST00000372243 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
TMEM53-204ENST00000372243 K7EPK0 472 aa12.51□□□□□ -0.41
TMEM53-204ENST00000372243 NXPH3O95157 252 aa12.51□□□□□ -0.41
TMEM53-204ENST00000372243 PSMB6P28072 239 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms