RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 TSPOP30536 169 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 PSG9Q00887 426 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM30BQ3MIR4 351 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 ATOH7Q8N100 152 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 RNASEH2CQ8TDP1 164 aaKnown RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM160Q9NX00 188 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 SPRR3Q9UBC9 169 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 NPIPB11E5RHQ5 1161 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 GFI1BQ5VTD9 330 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 GOLT1AQ6ZVE7 132 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 SPSB4Q96A44 273 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 IFT22Q9H7X7 185 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 ZFC3H1O60293 1989 aaKnown RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 LOC102723996A0A087X1L8 192 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 IGHV3-73A0A0B4J1V6 119 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 A6NDN8 102 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 SAP30O75446 220 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 HLA-DQB1P01920 261 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 FAM3BP58499 235 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 CLRN3Q8NCR9 226 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 LSM10Q969L4 123 aaKnown RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 RHOVQ96L33 236 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 ZNF430Q9H8G1 570 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 CFHR1Q03591 330 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 IBA57Q5T440 356 aaKnown RBP8.29□□□□□ -1.08
COL4A6-202ENST00000372216 ZCCHC24Q8N2G6 241 aaKnown RBP8.29□□□□□ -1.08
COL4A6-202ENST00000372216 PINLYPA6NC86 204 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 FAM71F2Q6NXP2 309 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 MAP1LC3AQ9H492 121 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 SBF1O95248 1867 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 PIN1P1O15428 100 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 KLF4O43474 513 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 PNRC1Q12796 327 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-202ENST00000372216 LDLRAD2Q5SZI1 272 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 DEPPQ9NTK1 212 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 OR5AC2Q9NZP5 309 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 TRAV30A0A087WSZ9 112 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 ZNF818PQ6ZRF7 136 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 PTPRZ1P23471 2315 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-202ENST00000372216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
COL4A6-202ENST00000372216 ASPHD2Q6ICH7 369 aa8.29□□□□□ -1.08
COL4A6-202ENST00000372216 MARCH11A6NNE9 402 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 COX6CP09669 75 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 FAM89BQ8N5H3 189 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 KIR3DL3Q8N743 410 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 UNC13CQ8NB66 2214 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 NUP214P35658 2090 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 DNAL4O96015 105 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 ARL14EPLP0DKL9 152 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 GNLYP22749 145 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 PPP1R27Q86WC6 154 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 FAM216BQ8N7L0 139 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 MRPL30Q8TCC3 161 aaKnown RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 FBXL7Q9UJT9 491 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 GPR132Q9UNW8 380 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 NYNRINQ9P2P1 1898 aaKnown RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 TRBV20OR9-2A0A075B6H5 130 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 B4DEV8 164 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 EFEMP2O95967 443 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 NPC2P61916 151 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 UNC119Q13432 240 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 FAM74A3Q4VXF1 159 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 OR4D5Q8NGN0 318 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 SLC25A38Q96DW6 304 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 GALNT14Q96FL9 552 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 NINQ8N4C6 2090 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 ZG16O60844 167 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 C9orf62Q8N4C0 152 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 OR9G4Q8NGQ1 327 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 TNFSF18Q9UNG2 199 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 CHD5Q8TDI0 1954 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 THSD7BQ9C0I4 1608 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 C1QL2Q7Z5L3 287 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 OR51G1Q8NGK1 321 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 C8orf46Q8TAG6 207 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 FBLIM1Q8WUP2 373 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 ZNF837Q96EG3 531 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 ALKBH7Q9BT30 221 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-202ENST00000372216 CBLN4Q9NTU7 201 aa8.28□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 A6NJY4 79 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 NPIPB9F8W1W9 429 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 H3BQ15 152 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 KIAA1644Q3SXP7 199 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 CBLN2Q8IUK8 224 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 SFRP2Q96HF1 295 aa8.27□□□□□ -1.08
COL4A6-202ENST00000372216 IGHV3-64A0A075B6Q5 118 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 KLK2P20151 261 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM95Q3KNT9 176 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 C1QTNF12Q5T7M4 302 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 LINC00305Q7Z4B0 112 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 C1QTNF5Q9BXJ0 243 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 CACNA1CQ13936 2221 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 RAB9AP51151 201 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 ERVK11-1P61568 191 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms