RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 HMGA2P52926 109 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 MSRB3Q8IXL7 192 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 MRPL32Q9BYC8 188 aaKnown RBP13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 TRPM3Q9HCF6 1732 aaPredicted RBP13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 LSM6P62312 80 aaKnown RBP13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 RAX2Q96IS3 184 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 C5orf66Q9H5L9 145 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 SCTP09683 121 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 TSPOP30536 169 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 NOVP48745 357 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 CCDC144NLQ6NUI1 221 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 TMEM91Q6ZNR0 172 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 SCN10AQ9Y5Y9 1956 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 ZIC3O60481 467 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 NTN1O95631 604 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 PSMG4Q5JS54 123 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 GATD1Q8NB37 220 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 RND2P52198 227 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 C19orf24Q9BVV8 132 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 NPIPB4C9JG80 1138 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 HBDP02042 147 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 SUMO4Q6EEV6 95 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 ERG28Q9UKR5 140 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 RTN4RL2Q86UN3 420 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 SPSB2Q99619 263 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 RPP21Q9H633 154 aaKnown RBP13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 IZUMO1RA6ND01 250 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 GCHFRP30047 84 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 GGTLC2Q14390 218 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 C2orf82Q6UX34 121 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 UBE2V1Q13404 147 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 C2orf68Q2NKX9 166 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 DUX5Q96PT3 197 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 A8MXK9 166 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 IGKCP01834 107 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 GPX4P36969 197 aaPredicted RBP13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 TRAV24A0A0B4J272 114 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
GTF3C4-201ENST00000372146 ARID2Q68CP9 1835 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 NKX2-2O95096 273 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 TRACP01848 142 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 GAGE2AQ6NT46 116 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 LAMTOR3Q9UHA4 124 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 RALGAPA2Q2PPJ7 1873 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 IGHV3-48P01763 117 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 ATP5IP56385 69 aaPredicted RBP13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 TMPRSS3P57727 454 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 AGFG2O95081 481 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 MOSP00540 346 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 GUSBP11Q6P575 273 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 LOC105371242A0A075B767 164 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 PPIAL4CA0A0B4J2A2 164 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.3
GTF3C4-201ENST00000372146 VWC2LB2RUY7 222 aa13.15□□□□□ -0.31
GTF3C4-201ENST00000372146 UNC119Q13432 240 aa13.15□□□□□ -0.31
GTF3C4-201ENST00000372146 FGFRL1Q8N441 504 aa13.15□□□□□ -0.31
GTF3C4-201ENST00000372146 hCG_38984A0A1B0GV85 526 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 CST9LQ9H4G1 147 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 TCRBV5S1A1TA0A578 114 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 MKRN2OSH3BPM6 223 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 ZG16O60844 167 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 ZNF688P0C7X2 276 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 IRF3Q14653 427 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 LHX8Q68G74 356 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 SPINK14Q6IE38 97 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 ITGB1BP1O14713 200 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 TMEM186Q96B77 213 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 CHTOPQ9Y3Y2 248 aaKnown RBP13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 Q5BKY6 102 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 PPP1R3EQ9H7J1 279 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 TMEM229AB2RXF0 380 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 SPINT1O43278 529 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 HCFC1P51610 2035 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 IFITM1P13164 125 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 HIST1H2BLQ99880 126 aa13.14□□□□□ -0.31
GTF3C4-201ENST00000372146 NCR2O95944 276 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 AQP3Q92482 292 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 GGTLC1Q9BX51 225 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms