RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ZBTB34Q8NCN2 500 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 SCNM1Q9BWG6 230 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 SLC25A22Q9H936 323 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 TUBG2Q9NRH3 451 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 ADH4P08319 380 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 CD40P25942 277 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 RPRMQ9NS64 109 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 NAGKQ9UJ70 344 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 FAM87AP0C7U9 286 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 ASCL5Q7RTU5 278 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 RNF2Q99496 336 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 ARV1Q9H2C2 271 aa14.19□□□□□ -0.14
VEGFA-205ENST00000372067 CEACAM4O75871 244 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 BMI1P35226 326 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 FAM216BQ8N7L0 139 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 LRFN3Q9BTN0 628 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 ZNF665Q9H7R5 613 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 CALYQ9NYX4 217 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 SRRM5B3KS81 715 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 IGLV2-14P01704 120 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 UBE2V1Q13404 147 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 WDR25Q64LD2 544 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-205ENST00000372067 TBX15Q96SF7 602 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 HSD17B10Q99714 261 aaKnown RBP14.18□□□□□ -0.14
VEGFA-205ENST00000372067 VSIRQ9H7M9 311 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 A0A1B0GUS0 222 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 LINC00473A8K010 186 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 NPIPB11E5RHQ5 1161 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 PRR30Q53SZ7 412 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-205ENST00000372067 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-205ENST00000372067 HES4Q9HCC6 221 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 OR6C3Q9NZP0 311 aa14.18□□□□□ -0.14
VEGFA-205ENST00000372067 PTPRQQ9UMZ3 2332 aa14.17□□□□□ -0.14
VEGFA-205ENST00000372067 LRRC30A6NM36 301 aa14.17□□□□□ -0.14
VEGFA-205ENST00000372067 RND2P52198 227 aa14.17□□□□□ -0.14
VEGFA-205ENST00000372067 TNFRSF14Q92956 283 aa14.17□□□□□ -0.14
VEGFA-205ENST00000372067 NIPSNAP3BQ9BS92 247 aa14.17□□□□□ -0.14
VEGFA-205ENST00000372067 TRAT1Q6PIZ9 186 aa14.17□□□□□ -0.14
VEGFA-205ENST00000372067 SPTBN1Q01082 2364 aaKnown RBP14.17□□□□□ -0.14
VEGFA-205ENST00000372067 IGFL3Q6UXB1 125 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 ZNF525Q8N782 197 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 TVP23CQ96ET8 276 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 MAP1LC3B2A6NCE7 125 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 A6NJY4 79 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 IFNA1P01562 189 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 DOLPP1Q86YN1 238 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 QTRT1Q9BXR0 403 aaKnown RBP14.16□□□□□ -0.14
VEGFA-205ENST00000372067 MAP1LC3BQ9GZQ8 125 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 LAMP3Q9UQV4 416 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 A0A1B0GW64 132 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 NUPR1O60356 82 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 CDC34P49427 236 aaPredicted RBP14.16□□□□□ -0.14
VEGFA-205ENST00000372067 RBPJQ06330 500 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 HIPK2Q9H2X6 1198 aa14.16□□□□□ -0.14
VEGFA-205ENST00000372067 TRBV24-1A0A075B6N3 115 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 LOC102724200A0A096LPH7 203 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-205ENST00000372067 TIMP3P35625 211 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 FFAR4Q5NUL3 377 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 SPSB3Q6PJ21 355 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 C1orf174Q8IYL3 243 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 ORAOV1Q8WV07 137 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 DMXL1Q9Y485 3027 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 ZNF292O60281 2723 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 A0A0G2JNJ9 132 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 C22orf34Q6ZV56 151 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 PRR7Q8TB68 274 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 KIAA1456Q9P272 454 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 Q9UFV3 132 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 SPTAN1Q13813 2472 aaKnown RBP14.15□□□□□ -0.14
VEGFA-205ENST00000372067 YPEL1O60688 119 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 IGHV1-46P01743 117 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 ZNF66Q6ZN08 573 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 SPACA3Q8IXA5 215 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 RND1Q92730 232 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 TAF15Q92804 592 aaKnown RBP eCLIP14.15□□□□□ -0.14
VEGFA-205ENST00000372067 CIB3Q96Q77 187 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-205ENST00000372067 YPEL2Q96QA6 119 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 C20orf144Q9BQM9 153 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 PAM16Q9Y3D7 125 aa14.15□□□□□ -0.14
VEGFA-205ENST00000372067 FAM90A27PA6NNH2 459 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 SLC25A6P12236 298 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 TGIF2LYQ8IUE0 185 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 TMEM18Q96B42 140 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 BSPH1Q075Z2 132 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 ICAM4Q14773 271 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 MORN2Q502X0 79 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 PDLIM3Q53GG5 364 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-205ENST00000372067 PINX1Q96BK5 328 aaKnown RBP14.14□□□□□ -0.15
VEGFA-205ENST00000372067 RAB9BQ9NP90 201 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 TOMM40O96008 361 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 OR5G3P0C626 314 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 TNFRSF1AP19438 455 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 OR10J1P30954 320 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 LINC01551Q86U37 167 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 RPUSD4Q96CM3 377 aaKnown RBP14.14□□□□□ -0.15
VEGFA-205ENST00000372067 SNRNP40Q96DI7 357 aaKnown RBP14.14□□□□□ -0.15
VEGFA-205ENST00000372067 C5orf30Q96GV9 206 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 TMEM147Q9BVK8 224 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 SAP30LQ9HAJ7 183 aa14.14□□□□□ -0.15
VEGFA-205ENST00000372067 ZNF705FA8MVS1 300 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms