RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 COMMD9Q9P000 198 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.53
SS18L1-202ENST00000370848 RABL2BQ9UNT1 228 aa11.71□□□□□ -0.53
SS18L1-202ENST00000370848 DYNC2H1Q8NCM8 4307 aaKnown RBP11.71□□□□□ -0.54
SS18L1-202ENST00000370848 ANKRD20A5PA0PJZ0 165 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 UPK2O00526 184 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 MPPED1O15442 326 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 CREBL2O60519 120 aaPredicted RBP11.7□□□□□ -0.54
SS18L1-202ENST00000370848 ACTL6BO94805 426 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 AKAIN1P0CW23 69 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 G6PCP35575 357 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
SS18L1-202ENST00000370848 RPL8P62917 257 aaKnown RBP11.7□□□□□ -0.54
SS18L1-202ENST00000370848 RUNX1Q01196 453 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 PYDC2Q56P42 97 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
SS18L1-202ENST00000370848 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 OR11H1Q8NG94 326 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 OR13C8Q8NGS7 320 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 TERB2Q8NHR7 220 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 MARCH1Q8TCQ1 289 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 CD300LFQ8TDQ1 290 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 TRIM63Q969Q1 353 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 FYTTD1Q96QD9 318 aaKnown RBP11.7□□□□□ -0.54
SS18L1-202ENST00000370848 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
SS18L1-202ENST00000370848 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 KRASP01116 189 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 HLA-GP17693 338 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 S100A5P33763 92 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 PIGPP57054 158 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 ZNF45Q02386 682 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 MEF2DQ14814 521 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 OR6Q1Q8NGQ2 317 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 OR4A5Q8NH83 315 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 THAP7Q9BT49 309 aaPredicted RBP11.69□□□□□ -0.54
SS18L1-202ENST00000370848 NSG2Q9Y328 171 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 TNCP24821 2201 aa11.69□□□□□ -0.54
SS18L1-202ENST00000370848 IGHV4OR15-8A0A075B7B6 117 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 A0A087WW49 117 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 DISC1C4P0D8 188 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 H3BUA1 57 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
SS18L1-202ENST00000370848 OR9G9P0C7N8 305 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 AREGP15514 252 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 RND3P61587 244 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 OR51S1Q8NGJ8 323 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 SLA2Q9H6Q3 261 aa11.68□□□□□ -0.54
SS18L1-202ENST00000370848 RYR2Q92736 4967 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 REG1AP05451 166 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 S100GP29377 79 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 CD40LGP29965 261 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 MAS1LP35410 378 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 INSL3P51460 131 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 SLURP1P55000 103 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 OR2B8PP59922 312 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 ERVK-16P61578 105 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 KLF9Q13886 244 aaPredicted RBP11.67□□□□□ -0.54
SS18L1-202ENST00000370848 Q8N402 240 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
SS18L1-202ENST00000370848 ZNF486Q96H40 463 aaPredicted RBP11.67□□□□□ -0.54
SS18L1-202ENST00000370848 DBX1A6NMT0 343 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 CTSDP07339 412 aaPredicted RBP11.66□□□□□ -0.54
SS18L1-202ENST00000370848 ZNF616Q08AN1 781 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 SP6Q3SY56 376 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 ZFAND1Q8TCF1 268 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 AIFM2Q9BRQ8 373 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 RTBDNQ9BSG5 229 aaPredicted RBP11.66□□□□□ -0.54
SS18L1-202ENST00000370848 SRRQ9GZT4 340 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 COPZ2Q9P299 210 aa11.66□□□□□ -0.54
SS18L1-202ENST00000370848 C13orf42A0A1B0GVH6 325 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 H0Y980 276 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 TRBV12-3P01733 135 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 PTBP1P26599 531 aaKnown RBP eCLIP11.65□□□□□ -0.54
SS18L1-202ENST00000370848 ETV6P41212 452 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 RHOGP84095 191 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 PRRT1Q99946 306 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 FAM212BQ9NTI7 297 aaPredicted RBP11.65□□□□□ -0.54
SS18L1-202ENST00000370848 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 GPR132Q9UNW8 380 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 U3KQK5 164 aa11.65□□□□□ -0.54
SS18L1-202ENST00000370848 SACSQ9NZJ4 4579 aa11.65□□□□□ -0.55
SS18L1-202ENST00000370848 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
SS18L1-202ENST00000370848 C3orf85A0A1B0GTC6 90 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms