RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 RPL27AP46776 148 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 CCL20P78556 96 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 LCN2P80188 198 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 FLI1Q01543 452 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 Q56UQ5 140 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 OR4C13Q8NGP0 309 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 ZNF596Q8TC21 504 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 YPEL2Q96QA6 119 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 WDR61Q9GZS3 305 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 SEBOXQ9HB31 216 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 VAX2Q9UIW0 290 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 S4R3C0 116 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 TRAV3A0A0B4J244 114 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 A8MXK9 166 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 E7EQL1 145 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 CA2P00918 260 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 BPIFB3P59826 476 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 ERVK11-1P61568 191 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 UBE2L3P68036 154 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 ZNF90Q03938 601 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 UNQ6494/PRO21346Q6UXR6 183 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 SPNS3Q6ZMD2 512 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 OR4X1Q8NH49 305 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 FAM122AQ96E09 287 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 WASHC3Q9Y3C0 194 aa5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 AMMECR1Q9Y4X0 333 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-202ENST00000370399 TMEM50AO95807 157 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 IGLV1-44P01699 117 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 HTR1DP28221 377 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 ERVFC1-1P60608 527 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 SUMO1P63165 101 aaKnown RBP5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 ZNF585BQ52M93 769 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 C10orf55Q5SWW7 151 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 C15orf54Q8N8G6 183 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 TMEM37Q8WXS4 190 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 GINS3Q9BRX5 216 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 ANAPC10Q9UM13 185 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 LINC00312Q9Y6C7 94 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 NUP210LQ5VU65 1888 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 ZNF320A2RRD8 509 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 CRYBA1P05813 215 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 BCL2P10415 239 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 SNRPEP62304 92 aaKnown RBP5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 AP1S3Q96PC3 154 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 DMRTA2Q96SC8 542 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 FBXL15Q9H469 300 aa5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 MBNL3Q9NUK0 354 aaKnown RBP5.9□□□□□ -1.46
TGFBR3-202ENST00000370399 LOC105371242A0A075B767 164 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 H3BTX0 84 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 CLDN34H7C241 214 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 CEACAM4O75871 244 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 GNLYP22749 145 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 RND2P52198 227 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 BSXQ3C1V8 233 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF672Q499Z4 452 aaPredicted RBP5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF525Q8N782 197 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 VSIRQ9H7M9 311 aa5.9□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF705GA8MUZ8 300 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 LIPFP07098 398 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 COL8A2P25067 703 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 ECSCRQ19T08 205 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 GCSAMLQ5JQS6 135 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 KHDC1LQ5JSQ8 128 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 CRIP3Q6Q6R5 217 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 NPIPB3Q92617 1050 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 CLEC7AQ9BXN2 247 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF705FA8MVS1 300 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 RRHO14718 337 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 PPP1R2P9O14990 202 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 NDUFB4O95168 129 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 CGAP01215 116 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 FAM157CP0CG43 387 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF705DP0CH99 300 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF705BP0CI00 300 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 MC5RP33032 325 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 GAMTQ14353 236 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 MSMPQ1L6U9 139 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 KHDC3LQ587J8 217 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 C22orf34Q6ZV56 151 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 C11orf53Q8IXP5 236 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 SGK494Q96LW2 274 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 FAM103A1Q9BTL3 118 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 SLC45A2Q9UMX9 530 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 LY86O95711 162 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 LINC00869P0C866 280 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 SAA1P0DJI8 122 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 CA7P43166 264 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 ATP5J2P56134 94 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 RANP62826 216 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 MEF2BQ02080 365 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 TMEM200BQ69YZ2 307 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 OR10W1Q8NGF6 305 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 TMEM186Q96B77 213 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 COA4Q9NYJ1 87 aa5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 RPUSD1Q9UJJ7 312 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 TNRC6AQ8NDV7 1962 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-202ENST00000370399 MMP23AO75900 390 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms