RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ZNF695Q8IW36 515 aa10.8□□□□□ -0.68
SSR4-202ENST00000370085 MRPL41Q8IXM3 137 aaKnown RBP10.8□□□□□ -0.68
SSR4-202ENST00000370085 CENPSQ8N2Z9 138 aa10.8□□□□□ -0.68
SSR4-202ENST00000370085 OR4A16Q8NH70 328 aa10.8□□□□□ -0.68
SSR4-202ENST00000370085 TMEM222Q9H0R3 208 aa10.8□□□□□ -0.68
SSR4-202ENST00000370085 ZNF355PQ9NSJ1 428 aa10.8□□□□□ -0.68
SSR4-202ENST00000370085 VSIG4Q9Y279 399 aa10.8□□□□□ -0.68
SSR4-202ENST00000370085 NUDT19A8MXV4 375 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 CYB5BO43169 146 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 LYRM1O43325 122 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 PSMB8P28062 276 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 RAB25P57735 213 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
SSR4-202ENST00000370085 SP6Q3SY56 376 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 HSD17B13Q7Z5P4 300 aaPredicted RBP10.79□□□□□ -0.68
SSR4-202ENST00000370085 FAM219AQ8IW50 185 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 RBPMSQ93062 196 aaKnown RBP10.79□□□□□ -0.68
SSR4-202ENST00000370085 GALNT14Q96FL9 552 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 SEC22AQ96IW7 307 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 FYTTD1Q96QD9 318 aaKnown RBP10.79□□□□□ -0.68
SSR4-202ENST00000370085 SRSF8Q9BRL6 282 aaKnown RBP10.79□□□□□ -0.68
SSR4-202ENST00000370085 FBXO7Q9Y3I1 522 aa10.79□□□□□ -0.68
SSR4-202ENST00000370085 A0A1W2PRX2 142 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 NDUFB6O95139 128 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 CDS2O95674 445 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 IGLV1-40P01703 118 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 EGR2P11161 476 aaPredicted RBP10.78□□□□□ -0.68
SSR4-202ENST00000370085 VAMP1P23763 118 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 CCR6P51684 374 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 RPL23AP62750 156 aaKnown RBP10.78□□□□□ -0.68
SSR4-202ENST00000370085 C10orf99Q6UWK7 81 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 ADAD2Q8NCV1 583 aaKnown RBP10.78□□□□□ -0.68
SSR4-202ENST00000370085 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 OR5B3Q8NH48 314 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 IL22RA2Q969J5 263 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 QTRT1Q9BXR0 403 aaKnown RBP10.78□□□□□ -0.68
SSR4-202ENST00000370085 COA4Q9NYJ1 87 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 CACFD1Q9UGQ2 172 aa10.78□□□□□ -0.68
SSR4-202ENST00000370085 A0A0G2JLM5 398 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 UPK1BO75841 260 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 RPLP1P05386 114 aaKnown RBP10.77□□□□□ -0.69
SSR4-202ENST00000370085 IL6RP08887 468 aaPredicted RBP10.77□□□□□ -0.69
SSR4-202ENST00000370085 OR9G9P0C7N8 305 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 TRAPPC2P0DI81 140 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 TRAPPC2BP0DI82 140 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 CDX1P47902 265 aaPredicted RBP10.77□□□□□ -0.69
SSR4-202ENST00000370085 RAB9AP51151 201 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 DEFA1P59665 94 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 DEFA3P59666 94 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 SSBP2P81877 361 aaPredicted RBP10.77□□□□□ -0.69
SSR4-202ENST00000370085 MRGPRG-AS1Q2M3A8 158 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 C19orf54Q5BKX5 351 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 TCTEX1D4Q5JR98 221 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 TMEM268Q5VZI3 342 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 LGI3Q8N145 548 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 FAM110DQ8TAY7 271 aaPredicted RBP10.77□□□□□ -0.69
SSR4-202ENST00000370085 GLYATL2Q8WU03 294 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 TMEM56Q96MV1 263 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 ZNF257Q9Y2Q1 563 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 OR51B2Q9Y5P1 312 aa10.77□□□□□ -0.69
SSR4-202ENST00000370085 FAM240BA0A1B0GVZ2 78 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 C15orf61A6NNL5 157 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 IGKV1-39P01597 117 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 PF4P02776 101 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TRGV3P03979 118 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 IGKV1D-39P04432 117 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 DEFA4P12838 97 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TPPP2P59282 170 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 PRR31Q5SQ13 230 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TTC9CQ8N5M4 171 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TMEM230Q96A57 120 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 HINT2Q9BX68 163 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TMEM14BQ9NUH8 114 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TMEM56-RWDD3S4R434 201 aa10.76□□□□□ -0.69
SSR4-202ENST00000370085 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 C13orf42A0A1B0GVH6 325 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 PLA2G10O15496 165 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 BRI3O95415 125 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 APELAP0DMC3 54 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 MECP2P51608 486 aaKnown RBP10.75□□□□□ -0.69
SSR4-202ENST00000370085 OR2B8PP59922 312 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 ASAH1Q13510 395 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 TMEM187Q14656 261 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 ZNF429Q86V71 674 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 C4orf3Q8WVX3 66 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 LSM10Q969L4 123 aaKnown RBP10.75□□□□□ -0.69
SSR4-202ENST00000370085 USMG5Q96IX5 58 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 NSG2Q9Y328 171 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
SSR4-202ENST00000370085 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
SSR4-202ENST00000370085 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
SSR4-202ENST00000370085 DUXBA0A1W2PPF3 345 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms