RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
PHGDH-201ENST00000369407 MOB1BQ7L9L4 216 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 Q8N976 141 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 STARD4Q96DR4 205 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 ZNF576Q9H609 170 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 NRN1Q9NPD7 142 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 MBNL3Q9NUK0 354 aaKnown RBP10.22□□□□□ -0.77
PHGDH-201ENST00000369407 WIPI2Q9Y4P8 454 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 MAP1BP46821 2468 aaKnown RBP10.22□□□□□ -0.77
PHGDH-201ENST00000369407 PSG1P11464 419 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 CYB561P49447 251 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 TRIP6Q15654 476 aaKnown RBP10.22□□□□□ -0.77
PHGDH-201ENST00000369407 RAB30Q15771 203 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 VWC2Q2TAL6 325 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 LCN12Q6JVE5 192 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 MDP1Q86V88 176 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 GPX1P07203 203 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 MAGEA5P43359 124 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 LGALS4P56470 323 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 SAP25Q8TEE9 199 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 TNRC6AQ8NDV7 1962 aaKnown RBP10.21□□□□□ -0.77
PHGDH-201ENST00000369407 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-201ENST00000369407 CGAP01215 116 aa10.21□□□□□ -0.77
PHGDH-201ENST00000369407 RTL8AQ9BWD3 113 aa10.21□□□□□ -0.77
PHGDH-201ENST00000369407 GGTLC1Q9BX51 225 aa10.21□□□□□ -0.77
PHGDH-201ENST00000369407 PKIBQ9C010 78 aa10.21□□□□□ -0.77
PHGDH-201ENST00000369407 ZNF430Q9H8G1 570 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-201ENST00000369407 TP73-AS1Q9UF72 201 aa10.21□□□□□ -0.77
PHGDH-201ENST00000369407 CD46P15529 392 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 EDDM3AQ14507 147 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 PPP1R32Q7Z5V6 425 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 OR4P4Q8NGL7 312 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 IL19Q9UHD0 177 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 FZR1Q9UM11 496 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 GPR179Q6PRD1 2367 aa10.21□□□□□ -0.78
PHGDH-201ENST00000369407 CFIP05156 583 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 STAG3L2P0CL84 134 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 STAG3L3P0CL85 134 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 PRAMEF5Q5TYX0 476 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 PRAMEF6Q5VXH4 476 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 NHLRC2Q8NBF2 726 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 TMEM45BQ96B21 275 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 DUSP23Q9BVJ7 150 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 TMEM30CPA0ZSE6 113 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 AHRRA9YTQ3 701 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF253O75346 499 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 HYPMO75409 117 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 GCHFRP30047 84 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 ARR3P36575 388 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 IL11RAQ14626 422 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 RPEL1Q2QD12 228 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 GCNT2Q8N0V5 402 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 OR13A1Q8NGR1 328 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 A0A1W2PS18 150 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 CXorf1O96002 111 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 MYOD1P15172 320 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 CRYBB3P26998 211 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 SRIP30626 198 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF83P51522 516 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 CLDN18P56856 261 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 ERVK11-1P61568 191 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 EIF4EBP1Q13541 118 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF718Q3SXZ3 478 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 COQ2Q96H96 371 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 EAF1Q96JC9 268 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-201ENST00000369407 PCED1AQ9H1Q7 454 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 SERTAD4Q9NUC0 356 aa10.2□□□□□ -0.78
PHGDH-201ENST00000369407 FOXF2Q12947 444 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 C1orf174Q8IYL3 243 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 HINT2Q9BX68 163 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 OBP2BQ9NPH6 170 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 LOXL2Q9Y4K0 774 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 CENPWQ5EE01 88 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 OR4A47Q6IF82 309 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 Q8TCH9 128 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 CSTL1Q9H114 145 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 MEGF9Q9H1U4 602 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 V9GYV3 84 aa10.19□□□□□ -0.78
PHGDH-201ENST00000369407 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF891A8MT65 544 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-201ENST00000369407 PATE3B3GLJ2 98 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 GATA2P23769 480 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-201ENST00000369407 EFNB3Q15768 340 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 OCIAD2Q56VL3 154 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 RPL39P5Q59GN2 51 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 LINC00696Q6ZRV3 163 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 MIR17HGQ75NE6 70 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 OR4A16Q8NH70 328 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 LINC00470Q9BZP3 86 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 GCM1Q9NP62 436 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 PROP1O75360 226 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 IGLC2P0DOY2 106 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms