RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 TMEM213A2RRL7 107 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 TNFSF12O43508 249 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 DHFRP00374 187 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 CRYGCP07315 174 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 DEFA4P12838 97 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 PSMB6P28072 239 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 MAS1LP35410 378 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 EIF4EBP1Q13541 118 aaPredicted RBP7.75□□□□□ -1.17
CLRN3-201ENST00000368671 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 BTNL8Q6UX41 500 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 UXS1Q8NBZ7 420 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 GGTLC1Q9BX51 225 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 DCSTAMPQ9H295 470 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 ANXA10Q9UJ72 324 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 BLOC1S6Q9UL45 172 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 CSMD3Q7Z407 3707 aa7.75□□□□□ -1.17
CLRN3-201ENST00000368671 LOC102724200A0A096LPH7 203 aaPredicted RBP7.74□□□□□ -1.17
CLRN3-201ENST00000368671 MFSD2BA6NFX1 497 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 NOTOA8MTQ0 251 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 A8MWP6 167 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 SSX5O60225 188 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 HRASP01112 189 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 HIST1H1BP16401 226 aaKnown RBP7.74□□□□□ -1.17
CLRN3-201ENST00000368671 CTRB1P17538 263 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 BRWD1-AS2P59051 145 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 ARPC4P59998 168 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 RPL8P62917 257 aaKnown RBP7.74□□□□□ -1.17
CLRN3-201ENST00000368671 PMS2P11Q13670 270 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 CTRB2Q6GPI1 263 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 OR4A47Q6IF82 309 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 IZUMO2Q6UXV1 221 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 ZNF66Q6ZN08 573 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 SECTM1Q8WVN6 248 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 HRASLSQ9HDD0 168 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 CCL28Q9NRJ3 127 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 DAPK2Q9UIK4 370 aa7.74□□□□□ -1.17
CLRN3-201ENST00000368671 IGLV11-55A0A075B6I3 123 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 TRBV7-1A0A0A6YYK4 115 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 IGHV3-35A0A0C4DH35 117 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 CGB1A6NKQ9 187 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 SCGNO76038 276 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 CLEC3BP05452 202 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 PTHLHP12272 177 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 HLA-GP17693 338 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 GALP22466 123 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 GPR183P32249 361 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 ANKRD55Q3KP44 614 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 TIMM50Q3ZCQ8 353 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 ZNF585BQ52M93 769 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 UNQ9165/PRO28630Q6UXU0 137 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 RBPMS2Q6ZRY4 209 aaKnown RBP7.73□□□□□ -1.17
CLRN3-201ENST00000368671 SPAG16Q8N0X2 631 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 LGALS14Q8TCE9 139 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 CXorf58Q96LI9 332 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 OVOL2Q9BRP0 275 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 VCX3BQ9H321 246 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 TXNL4BQ9NX01 149 aaKnown RBP7.73□□□□□ -1.17
CLRN3-201ENST00000368671 BET1LQ9NYM9 111 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 UBQLN2Q9UHD9 624 aa7.73□□□□□ -1.17
CLRN3-201ENST00000368671 RRP15Q9Y3B9 282 aaKnown RBP7.73□□□□□ -1.17
CLRN3-201ENST00000368671 CXorf65A6NEN9 183 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 SULT1C2O00338 296 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 LY6G6CO95867 125 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 FCER2P06734 321 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 PSMB9P28065 219 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 FCGR2CP31995 323 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 FXYD4P59646 89 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 PLET1Q6UQ28 207 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 BEST4Q8NFU0 473 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 OR1L6Q8NGR2 347 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 OR13F1Q8NGS4 319 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 OR4A5Q8NH83 315 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 LINC00476Q8WZB0 136 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 TNCP24821 2201 aa7.72□□□□□ -1.17
CLRN3-201ENST00000368671 ALMS1Q8TCU4 4167 aa7.71□□□□□ -1.17
CLRN3-201ENST00000368671 TRAV18A0A075B6X5 111 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 TRAV3A0A0B4J244 114 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 TRAV25A0A0B4J276 109 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 A0A0J9YWU9 116 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 PPYP01298 95 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 RPA2P15927 270 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 FGF9P31371 208 aaPredicted RBP7.71□□□□□ -1.18
CLRN3-201ENST00000368671 HSPA13P48723 471 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 OR2B8PP59922 312 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 CATR1Q13166 79 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 KLK9Q2XQG4 91 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 SFXN4Q6P4A7 337 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 MARC2Q969Z3 335 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 AIFM2Q9BRQ8 373 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 COMMD5Q9GZQ3 224 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 SLC5A7Q9GZV3 580 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 RHBDL2Q9NX52 303 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 THYN1Q9P016 225 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
CLRN3-201ENST00000368671 KLK9Q9UKQ9 250 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 SSR3Q9UNL2 185 aa7.71□□□□□ -1.18
CLRN3-201ENST00000368671 UFC1Q9Y3C8 167 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms