RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 VPREB1P12018 145 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 AKR1C2P52895 323 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 AVPI1Q5T686 147 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 FAM53AQ6NSI3 398 aaPredicted RBP7.1□□□□□ -1.27
TPM3-213ENST00000368545 ZNF841Q6ZN19 808 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 SLC25A48Q6ZT89 311 aaKnown RBP7.1□□□□□ -1.27
TPM3-213ENST00000368545 TMUB2Q71RG4 321 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 ZNF767PQ75MW2 155 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 KCNRGQ8N5I3 272 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 C8orf31Q8N9H6 132 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 C8orf46Q8TAG6 207 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 C5orf30Q96GV9 206 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 ADTRPQ96IZ2 230 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 PRELID3BQ9Y3B1 194 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 KANTRA0A1W2PQU2 76 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 RNF222A6NCQ9 220 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 TRIM77I1YAP6 450 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 OVOL3O00110 214 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 LY6HO94772 140 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 CCL3L1P16619 93 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 DUTP33316 252 aaKnown RBP7.09□□□□□ -1.27
TPM3-213ENST00000368545 GPR6P46095 362 aaPredicted RBP7.09□□□□□ -1.27
TPM3-213ENST00000368545 ZNF585BQ52M93 769 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 CT45A1Q5HYN5 189 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 BTNL3Q6UXE8 466 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 CT45A3Q8NHU0 189 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 RNF126Q9BV68 326 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 USF3Q68DE3 2245 aa7.09□□□□□ -1.27
TPM3-213ENST00000368545 E5RGE8 158 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 K7EPK0 472 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 M0R1X1 148 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 RBFOX2O43251 390 aaKnown RBP eCLIP7.09□□□□□ -1.28
TPM3-213ENST00000368545 MMP23AO75900 390 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 IGKV1-39P01597 117 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 IGKV1D-39P04432 117 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 PVALBP20472 110 aaPredicted RBP7.09□□□□□ -1.28
TPM3-213ENST00000368545 NKX2-1P43699 371 aaPredicted RBP7.09□□□□□ -1.28
TPM3-213ENST00000368545 DLX6P56179 175 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 RPL30P62888 115 aaKnown RBP7.09□□□□□ -1.28
TPM3-213ENST00000368545 ICAM4Q14773 271 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 FAM71F2Q6NXP2 309 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 TEX261Q6UWH6 196 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 SPAG16Q8N0X2 631 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 FAM71E2Q8N5Q1 922 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 LINC00311Q8N616 119 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 ST6GALNAC6Q969X2 333 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 AQP10Q96PS8 301 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 S1PR3Q99500 378 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 REG4Q9BYZ8 158 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 HEXA-AS1Q9H8Q6 139 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 PATZ1Q9HBE1 687 aaKnown RBP7.09□□□□□ -1.28
TPM3-213ENST00000368545 COA4Q9NYJ1 87 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 NSG2Q9Y328 171 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 LSM5Q9Y4Y9 91 aaKnown RBP7.09□□□□□ -1.28
TPM3-213ENST00000368545 U3KQ87 197 aa7.09□□□□□ -1.28
TPM3-213ENST00000368545 CELSR1Q9NYQ6 3014 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 SAA2-SAA4A0A096LPE2 208 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 C17orf98A8MV24 154 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 SLC31A2O15432 143 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 BCL2L11O43521 198 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 IFNA7P01567 189 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 SAA2P0DJI9 122 aaPredicted RBP7.08□□□□□ -1.28
TPM3-213ENST00000368545 IGHV1-8P0DP01 117 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 LPAR6P43657 344 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 THBS3P49746 956 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 GNG10P50151 68 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 AP2S1P53680 142 aaPredicted RBP7.08□□□□□ -1.28
TPM3-213ENST00000368545 GNB2P62879 340 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 WDR25Q64LD2 544 aaPredicted RBP7.08□□□□□ -1.28
TPM3-213ENST00000368545 SLC51BQ86UW2 128 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 FOXRED2Q8IWF2 684 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 LYG1Q8N1E2 194 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 OR1S1Q8NH92 325 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 ZNF596Q8TC21 504 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 IGFBPL1Q8WX77 278 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 TNFRSF14Q92956 283 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 LEAP2Q969E1 77 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 OR5AC2Q9NZP5 309 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 MMP24Q9Y5R2 645 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 COL6A5A8TX70 2615 aa7.08□□□□□ -1.28
TPM3-213ENST00000368545 PPIAL4CA0A0B4J2A2 164 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 FAM90A26D6RGX4 464 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 RAMP3O60896 148 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 HPRT1P00492 218 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 PPIAL4GP0DN37 164 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 ARHGDIBP52566 201 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 UBA52P62987 128 aaKnown RBP7.07□□□□□ -1.28
TPM3-213ENST00000368545 NDUFA5Q16718 116 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 RPL39P5Q59GN2 51 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 ODF3L1Q8IXM7 274 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 OR4S2Q8NH73 311 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 GPR146Q96CH1 333 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 WRBO00258 174 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 TCF21O43680 179 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 PROP1O75360 226 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 PITX3O75364 302 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 S1PR2O95136 353 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 IGKV1-5P01602 117 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 IGHV3-7P01780 117 aa7.07□□□□□ -1.28
TPM3-213ENST00000368545 LIPFP07098 398 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms