RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 ZNF57Q68EA5 555 aaPredicted RBP12.01□□□□□ -0.49
CKS1B-202ENST00000368436 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 BEST4Q8NFU0 473 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 FCGR1BQ92637 280 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 MLXQ9UH92 298 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 TRBV7-1A0A0A6YYK4 115 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 ZNF320A2RRD8 509 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 TNFSF12O43508 249 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 PTHLHP12272 177 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 SDC2P34741 201 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 OR2B8PP59922 312 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 ARPC4P59998 168 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 POU2AF1Q16633 256 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 ZNF773Q6PK81 442 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 SLC16A13Q7RTY0 426 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 SPAG16Q8N0X2 631 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 GVQW1Q8N7I0 195 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 UXS1Q8NBZ7 420 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 OR13F1Q8NGS4 319 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 OR5H6Q8NGV6 325 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 SECTM1Q8WVN6 248 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 SLC25A38Q96DW6 304 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 CXorf58Q96LI9 332 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 ETV7Q9Y603 341 aa12□□□□□ -0.49
CKS1B-202ENST00000368436 PLECQ15149 4684 aaKnown RBP12□□□□□ -0.49
CKS1B-202ENST00000368436 TRAV18A0A075B6X5 111 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 A0A0A6YYH2 397 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 MFSD2BA6NFX1 497 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 A6NJ64 397 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 PPYP01298 95 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 REG1AP05451 166 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 CLEC3BP05452 202 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 C8orf88P0DMB2 117 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 DEFA4P12838 97 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 TAS2R31P59538 309 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 SRSF8Q9BRL6 282 aaKnown RBP11.99□□□□□ -0.49
CKS1B-202ENST00000368436 SELENOKQ9Y6D0 94 aa11.99□□□□□ -0.49
CKS1B-202ENST00000368436 TRAV3A0A0B4J244 114 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 IGLC7A0M8Q6 106 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 SULT1C2O00338 296 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 UPK2O00526 184 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 HPRT1P00492 218 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 FGF2P09038 288 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 CLEC2LP0C7M8 214 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 MXD1Q05195 221 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 ANKRD55Q3KP44 614 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 TM4SF20Q53R12 229 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 OR52B4Q8NGK2 314 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 MARC2Q969Z3 335 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 YTHDF1Q9BYJ9 559 aaKnown RBP11.98□□□□□ -0.49
CKS1B-202ENST00000368436 SLC5A7Q9GZV3 580 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 HRASLSQ9HDD0 168 aa11.98□□□□□ -0.49
CKS1B-202ENST00000368436 NQO2P16083 231 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 ELLP55199 621 aaPredicted RBP11.97□□□□□ -0.49
CKS1B-202ENST00000368436 CATR1Q13166 79 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 BTNL8Q6UX41 500 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 ZNF502Q8TBZ5 544 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 GIMAP1Q8WWP7 306 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 GGTLC1Q9BX51 225 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 RNF167Q9H6Y7 350 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 AUNIPQ9H7T9 357 aa11.97□□□□□ -0.49
CKS1B-202ENST00000368436 MRPL27Q9P0M9 148 aaKnown RBP11.97□□□□□ -0.49
CKS1B-202ENST00000368436 LOC102724200A0A096LPH7 203 aaPredicted RBP11.96□□□□□ -0.49
CKS1B-202ENST00000368436 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.49
CKS1B-202ENST00000368436 PTBP1P26599 531 aaKnown RBP eCLIP11.96□□□□□ -0.49
CKS1B-202ENST00000368436 GPR183P32249 361 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 IDNKQ5T6J7 187 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 ZNF818PQ6ZRF7 136 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 OR5AP2Q8NGF4 316 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 OVOL2Q9BRP0 275 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 ZNF436Q9C0F3 470 aaPredicted RBP11.96□□□□□ -0.49
CKS1B-202ENST00000368436 COMMD5Q9GZQ3 224 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 PLEKHA2Q9HB19 425 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 THYN1Q9P016 225 aa11.96□□□□□ -0.49
CKS1B-202ENST00000368436 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.5
CKS1B-202ENST00000368436 FXYD4P59646 89 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 ZNF585BQ52M93 769 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 CD300LFQ8TDQ1 290 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 VN1R17PQ8TDU5 208 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 DIABLOQ9NR28 239 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 TMEM140Q9NV12 185 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 UFC1Q9Y3C8 167 aa11.95□□□□□ -0.5
CKS1B-202ENST00000368436 TMEM127O75204 238 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 GNRHRP30968 328 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 CBX5P45973 191 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 THOC7Q6I9Y2 204 aaKnown RBP11.94□□□□□ -0.5
CKS1B-202ENST00000368436 PLET1Q6UQ28 207 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
CKS1B-202ENST00000368436 OR10W1Q8NGF6 305 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 OR1L6Q8NGR2 347 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
CKS1B-202ENST00000368436 C5orf66Q9H5L9 145 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 COMMD9Q9P000 198 aa11.94□□□□□ -0.5
CKS1B-202ENST00000368436 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 LOC100506127A0A0U1RQW1 187 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms