RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PITPNC1Q9UKF7 332 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 OTOGLQ3ZCN5 2332 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 SAA2-SAA4A0A096LPE2 208 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 SAA2P0DJI9 122 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-206ENST00000368215 IGFBP2P18065 325 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 DUTP33316 252 aaKnown RBP7.05□□□□□ -1.28
PTPRK-206ENST00000368215 GAMTQ14353 236 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 WDR31Q8NA23 367 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 OR8B3Q8NGG8 313 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 FAM57AQ8TBR7 257 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 OR8B2Q96RD0 313 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 TXN2Q99757 166 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 PARD6AQ9NPB6 346 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 LINC00473A8K010 186 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 SNURFLB1AK76 121 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 H3BTX0 84 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 RND2P52198 227 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 FAM122AQ96E09 287 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 A0A1W2PNU3 283 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-206ENST00000368215 HSBP1O75506 76 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 CRYBB3P26998 211 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 CSN1S1P47710 185 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 TPPP2P59282 170 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 RPL11P62913 178 aaKnown RBP7.05□□□□□ -1.28
PTPRK-206ENST00000368215 PAX5Q02548 391 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF585BQ52M93 769 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 OR5AU1Q8NGC0 362 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 OR1L6Q8NGR2 347 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 PIEZO2Q9H5I5 2752 aa7.05□□□□□ -1.28
PTPRK-206ENST00000368215 SRRM5B3KS81 715 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 IL6RP08887 468 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-206ENST00000368215 TDGF1P13385 188 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 RPL27AP46776 148 aaKnown RBP7.04□□□□□ -1.28
PTPRK-206ENST00000368215 ASCL5Q7RTU5 278 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 DIRC2Q96SL1 478 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 NABP2Q9BQ15 211 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 LPAR2Q9HBW0 351 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 TRBV23-1A0A0A0MS06 115 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 SERTM2A0A1B0GWG4 89 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 C10orf142B7Z368 130 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 FXYD3Q14802 87 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 Q6ZS49 121 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 HSPB7Q9UBY9 170 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 SLC25A15Q9Y619 301 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 TRAV3A0A0B4J244 114 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 CXorf65A6NEN9 183 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 AGAP20933 346 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 IL15RAQ13261 267 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 PQLC2Q6ZP29 291 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 PAXXQ9BUH6 204 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 MRPL20Q9BYC9 149 aaKnown RBP7.04□□□□□ -1.28
PTPRK-206ENST00000368215 SDF2L1Q9HCN8 221 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 TMEM106BQ9NUM4 274 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 HIF1ANQ9NWT6 349 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 WASHC3Q9Y3C0 194 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 TRBV6-6A0A0A6YYG2 114 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 TMEM250H0YL14 139 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 IGHG3P01860 377 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 AMTP48728 403 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 FAM90A1Q86YD7 464 aa7.04□□□□□ -1.28
PTPRK-206ENST00000368215 RPP25LQ8N5L8 163 aaKnown RBP7.04□□□□□ -1.28
PTPRK-206ENST00000368215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.284e-9■■■□□ 18
PTPRK-206ENST00000368215 LYNX1G3V0Z9 82 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 YPEL1O60688 119 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF253O75346 499 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IGHV1-46P01743 117 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 LYNX1P0DP58 116 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 GCHFRP30047 84 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 ARF6P62330 175 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IQCJQ1A5X6 159 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF474Q6S9Z5 364 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-206ENST00000368215 YPEL2Q96QA6 119 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 SCNM1Q9BWG6 230 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 SRD5A3Q9H8P0 318 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 CUL9Q8IWT3 2517 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IGHV1-69-2A0A0G2JMI3 117 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 C17orf100A8MU93 164 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 SLC31A2O15432 143 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 CGAP01215 116 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IGKV3-15P01624 115 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 CYP2G1PQ6ZSU1 146 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 OR8I2Q8N0Y5 310 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 OR2T6Q8NHC8 308 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 SLX1AQ9BQ83 275 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 AMMECR1Q9Y4X0 333 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IGKV1D-17A0A075B6S4 117 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 MYOD1P15172 320 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 CDX1P47902 265 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-206ENST00000368215 RNASEKQ6P5S7 137 aaKnown RBP7.03□□□□□ -1.28
PTPRK-206ENST00000368215 Q6ZR03 302 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 OR4F17Q8NGA8 305 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 UBTD1Q9HAC8 227 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 METTL1Q9UBP6 276 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms