RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
PTPRK-204ENST00000368210 RBKSQ9H477 322 aa11.29□□□□□ -0.6
PTPRK-204ENST00000368210 SEMA5BQ9P283 1151 aa11.29□□□□□ -0.6
PTPRK-204ENST00000368210 M0QZ24 198 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 CD5P06127 495 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
PTPRK-204ENST00000368210 CSRP2Q16527 193 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 POC1AQ8NBT0 407 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 NPVFQ9HCQ7 196 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 C1RLQ9NZP8 487 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 PTGDSP41222 190 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 CALHM1Q8IU99 346 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 OR2K2Q8NGT1 345 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 F8VVB4 439 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 F8VWA3 439 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 AMY1AP04745 511 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 OCIAD2Q56VL3 154 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 POLEQ07864 2286 aa11.28□□□□□ -0.6
PTPRK-204ENST00000368210 KLF7O75840 302 aaPredicted RBP11.27□□□□□ -0.6
PTPRK-204ENST00000368210 CEACAM1P13688 526 aa11.27□□□□□ -0.6
PTPRK-204ENST00000368210 TMEM105Q8N8V8 129 aa11.27□□□□□ -0.6
PTPRK-204ENST00000368210 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.6
PTPRK-204ENST00000368210 CALYQ9NYX4 217 aa11.27□□□□□ -0.6
PTPRK-204ENST00000368210 MGAMO43451 1857 aa11.27□□□□□ -0.6
PTPRK-204ENST00000368210 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 H3BUT2 72 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 C2orf68Q2NKX9 166 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.61
PTPRK-204ENST00000368210 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.61
PTPRK-204ENST00000368210 HERVK_113P61574 105 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
PTPRK-204ENST00000368210 C1QTNF5Q9BXJ0 243 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 SLC25A17O43808 307 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 ESDP10768 282 aa11.27□□□□□ -0.61
PTPRK-204ENST00000368210 SPTAN1Q13813 2472 aaKnown RBP11.26□□□□□ -0.61
PTPRK-204ENST00000368210 P01737 135 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 APELAP0DMC3 54 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 IZUMO4Q1ZYL8 232 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 SFXN3Q9BWM7 321 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 CYSLTR1Q9Y271 337 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 IGSF23A1L1A6 192 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 C9orf172C9J069 976 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 MPDU1O75352 247 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 OTX1P32242 354 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-204ENST00000368210 WNT5AP41221 380 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 GBGT1Q8N5D6 347 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.618e-7■□□□□ 10.9
PTPRK-204ENST00000368210 RASL11BQ9BPW5 248 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 SDF2L1Q9HCN8 221 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
PTPRK-204ENST00000368210 LGALS7P47929 136 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 RELBQ01201 579 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 BIVMQ86UB2 503 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
PTPRK-204ENST00000368210 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
PTPRK-204ENST00000368210 PRR19A6NJB7 356 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 STXBP6Q8NFX7 210 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 NTN3O00634 580 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-204ENST00000368210 GZMBP10144 247 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 CBLN1P23435 193 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 TMEM242Q9NWH2 141 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 TRAV9-2A0A087WT02 112 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 F2RL2O00254 374 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-204ENST00000368210 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 PXMP4Q9Y6I8 212 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 CDKN1BP46527 198 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 SLC35E4Q6ICL7 350 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 C10orf126Q8N4M7 172 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
PTPRK-204ENST00000368210 PERPQ96FX8 193 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 GTSF1LQ9H1H1 148 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 CST9LQ9H4G1 147 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 FOXD3Q9UJU5 478 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-204ENST00000368210 JPT1Q9UK76 154 aa11.25□□□□□ -0.61
PTPRK-204ENST00000368210 PTPRDP23468 1912 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 THADAQ6YHU6 1953 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 C7orf71A4D174 169 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 EFNA2O43921 213 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 SELENOTP62341 195 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 SEC11AP67812 179 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 GPR183P32249 361 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 MC5RP33032 325 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms