RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
USF1-203ENST00000368021 SSBP3Q9BWW4 388 aaPredicted RBP9.87□□□□□ -0.83
USF1-203ENST00000368021 DOK5Q9P104 306 aa9.87□□□□□ -0.83
USF1-203ENST00000368021 PPIAL4CA0A0B4J2A2 164 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 PROP1O75360 226 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 PPIAL4GP0DN37 164 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 IGHV1-8P0DP01 117 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 PSMB6P28072 239 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 DUTP33316 252 aaKnown RBP9.86□□□□□ -0.83
USF1-203ENST00000368021 SULT1A1P50225 295 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 SULT1A2P50226 295 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 ZNF585BQ52M93 769 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 NMSQ5H8A3 153 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 ODF3L1Q8IXM7 274 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 LRRC75A-AS1Q8N1F1 130 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 LINC00311Q8N616 119 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 LYPD6BQ8NI32 183 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 CD300LFQ8TDQ1 290 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 LEAP2Q969E1 77 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 Q96MF0 132 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 SPIN2AQ99865 258 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 SPIN2BQ9BPZ2 258 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 TMEM208Q9BTX3 173 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 hCG_1809904A0A1W2PP81 198 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 A0A1W2PPE2 198 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 A0A1W2PR64 198 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 A0A1W2PRV1 198 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 B4DEV8 164 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 PPP5D1E7EU14 171 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 IGHV3-7P01780 117 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 LIPFP07098 398 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 RD3LP0DJH9 198 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 NDUFA6P56556 154 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 RANP62826 216 aaKnown RBP9.86□□□□□ -0.83
USF1-203ENST00000368021 RPL30P62888 115 aaKnown RBP9.86□□□□□ -0.83
USF1-203ENST00000368021 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 LSM10Q969L4 123 aaKnown RBP9.86□□□□□ -0.83
USF1-203ENST00000368021 ZFHX3Q15911 3703 aa9.86□□□□□ -0.83
USF1-203ENST00000368021 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 LINC00473A8K010 186 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 C22orf46C9J442 243 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 RBFOX2O43251 390 aaKnown RBP eCLIP9.85□□□□□ -0.83
USF1-203ENST00000368021 FAM157CP0CG43 387 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
USF1-203ENST00000368021 SLC25A6P12236 298 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 ZNF16P17020 682 aaPredicted RBP9.85□□□□□ -0.83
USF1-203ENST00000368021 ERVFRD-1P60508 538 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 ERVFC1-1P60608 527 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 IQCJQ1A5X6 159 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 TNFRSF14Q92956 283 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
USF1-203ENST00000368021 BPESC1Q9GZL8 116 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 GSKIPQ9P0R6 139 aa9.85□□□□□ -0.83
USF1-203ENST00000368021 LOC105371242A0A075B767 164 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 M0R036 132 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 M0R1X1 148 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 OR2C1O95371 312 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 IGKV1-39P01597 117 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 OPN1MWP04001 364 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 IGKV1D-39P04432 117 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 OPN1MW2P0DN77 364 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 OPN1MW3P0DN78 364 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 HNF1AP20823 631 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 KIR2DS2P43631 304 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 BRWD1-AS2P59051 145 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 CLEC12BQ2HXU8 276 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 LRRC37A5PQ49AS3 106 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 RPL39P5Q59GN2 51 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 FAM71F2Q6NXP2 309 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 BTNL8Q6UX41 500 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 LYG1Q8N1E2 194 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 OR9G1Q8NH87 305 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 ADTRPQ96IZ2 230 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 S1PR3Q99500 378 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 TMEM133Q9H2Q1 129 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 FAM157AC9JC47 383 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 J3QR06 171 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 M0R1W7 72 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 RAMP3O60896 148 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 GAPDHP04406 335 aaKnown RBP9.84□□□□□ -0.83
USF1-203ENST00000368021 LYL1P12980 280 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 RPS10P46783 165 aaKnown RBP9.84□□□□□ -0.83
USF1-203ENST00000368021 ZNF137PP52743 207 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 RAB32Q13637 225 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 FAM219AQ8IW50 185 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 CIARTQ8N365 385 aaPredicted RBP9.84□□□□□ -0.83
USF1-203ENST00000368021 OR4D5Q8NGN0 318 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 DDB2Q92466 427 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 FAM168AQ92567 244 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 PIMREGQ9BSJ6 248 aa9.84□□□□□ -0.83
USF1-203ENST00000368021 STRAPQ9Y3F4 350 aaKnown RBP9.84□□□□□ -0.83
USF1-203ENST00000368021 MED13LQ71F56 2210 aa9.83□□□□□ -0.84
USF1-203ENST00000368021 MTORP42345 2549 aa9.83□□□□□ -0.84
USF1-203ENST00000368021 A0A1B0GU03 582 aa9.83□□□□□ -0.84
USF1-203ENST00000368021 KIAA1324LA8MWY0 1029 aaPredicted RBP9.83□□□□□ -0.84
USF1-203ENST00000368021 SMAD7O15105 426 aaKnown RBP9.83□□□□□ -0.84
USF1-203ENST00000368021 SNRNP70P08621 437 aaKnown RBP9.83□□□□□ -0.84
USF1-203ENST00000368021 G0S2P27469 103 aa9.83□□□□□ -0.84
USF1-203ENST00000368021 LPAR6P43657 344 aa9.83□□□□□ -0.84
USF1-203ENST00000368021 THBS3P49746 956 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms