RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 TM4SF5O14894 197 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 CRPP02741 224 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 KLK2P20151 261 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 RPL24P83731 157 aaKnown RBP7.66□□□□□ -1.18
SYNE1-205ENST00000367251 REPIN1Q9BWE0 567 aaKnown RBP7.66□□□□□ -1.18
SYNE1-205ENST00000367251 DNAJC4Q9NNZ3 241 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 PPIAL4CA0A0B4J2A2 164 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 FGF16O43320 207 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 GPX1P07203 203 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 LINC00271P0C7V0 271 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 PPIAL4GP0DN37 164 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 NPBWR2P48146 333 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 CFAP161Q6P656 301 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 FOXD3Q9UJU5 478 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-205ENST00000367251 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.66□□□□□ -1.18
SYNE1-205ENST00000367251 TGIF2-C20orf24A0A0A6YYL0 155 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 IGKV1D-43A0A0B4J1Z2 117 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 NPFFO15130 113 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 DNAL4O96015 105 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 LINC00869P0C866 280 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 SP9P0CG40 484 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 PSG9Q00887 426 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 GTSCR1Q86UQ5 136 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 TCF19Q9Y242 345 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 CHD5Q8TDI0 1954 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 RLFQ13129 1914 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 ZG16O60844 167 aa7.66□□□□□ -1.18
SYNE1-205ENST00000367251 MTCL1Q9Y4B5 1905 aaKnown RBP7.66□□□□□ -1.18
SYNE1-205ENST00000367251 OR4C46A6NHA9 309 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 BTF3P20290 206 aaKnown RBP7.65□□□□□ -1.18
SYNE1-205ENST00000367251 TWIST1Q15672 202 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 TIAF1O95411 115 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 TDGF1P13385 188 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 MIC13Q5XKP0 118 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 BPIFA4PQ86YQ2 179 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 OR8A1Q8NGG7 326 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 GATAD1Q8WUU5 269 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-205ENST00000367251 EIF3GO75821 320 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYNE1-205ENST00000367251 MALP21145 153 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 C1QL2Q7Z5L3 287 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 OR9G1Q8NH87 305 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 COPS9Q8WXC6 57 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 PARLQ9H300 379 aa7.65□□□□□ -1.18
SYNE1-205ENST00000367251 C9JCJ5 164 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 MFAP2P55001 183 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 ACP7Q6ZNF0 438 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 TMEM183AQ8IXX5 376 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 LRTM2Q8N967 370 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 VN1R17PQ8TDU5 208 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 MRPL18Q9H0U6 180 aaKnown RBP7.65□□□□□ -1.19
SYNE1-205ENST00000367251 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.19
SYNE1-205ENST00000367251 TRPM7Q96QT4 1865 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.19
SYNE1-205ENST00000367251 GREB1Q4ZG55 1949 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 TMEM189A5PLL7 270 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 PGPA6NDG6 321 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 IFITM10A6NMD0 228 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 PRR32B1ATL7 298 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 SRP19P09132 144 aaKnown RBP7.64□□□□□ -1.19
SYNE1-205ENST00000367251 LY6G6FQ5SQ64 297 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 CDCP2Q5VXM1 449 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 CYP2G1PQ6ZSU1 146 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 SNRPCP09234 159 aaKnown RBP7.64□□□□□ -1.19
SYNE1-205ENST00000367251 TMEM190Q8WZ59 177 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 SFRP2Q96HF1 295 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 GFI1Q99684 422 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 RNF126Q9BV68 326 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 LOC105371267A0A1B0GV96 52 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 IQCF6A8MYZ5 107 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 CEACAM4O75871 244 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 TRGV3P03979 118 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 SAMD13Q5VXD3 122 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF826PQ6ZT77 177 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 NUDT10Q8NFP7 164 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 OSR1Q8TAX0 266 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-205ENST00000367251 SDK2Q58EX2 2172 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 MSGN1A6NI15 193 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 GCHFRP30047 84 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 CA7P43166 264 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 GCSAMLQ5JQS6 135 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 TIMM23BQ5SRD1 257 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 NPCDR1Q9BY65 106 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 NPFFR1Q9GZQ6 430 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 IL17BQ9UHF5 180 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 PIKFYVEQ9Y2I7 2098 aa7.64□□□□□ -1.19
SYNE1-205ENST00000367251 TRBV6-7A0A0A0MS04 114 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 FAM90A9PA6NNJ1 464 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 NPPCP23582 126 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 C3orf36Q3SXR2 165 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 HCP5Q6MZN7 132 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 TPRX1Q8N7U7 411 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 NUDT11Q96G61 164 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 RCC1LQ96I51 464 aaKnown RBP7.63□□□□□ -1.19
SYNE1-205ENST00000367251 HSPB9Q9BQS6 159 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 UQCR10Q9UDW1 63 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms