RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 OR2T27Q8NH04 317 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 SGMS2Q8NHU3 365 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 OR8D2Q9GZM6 311 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 LAMA4Q16363 1823 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 PRH1P02810 166 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 RD3LP0DJH9 198 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 NFYAP23511 347 aaPredicted RBP0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 ZNF93P35789 620 aaPredicted RBP0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 RAB13P51153 203 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 SBSNQ6UWP8 590 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 CRLF3Q8IUI8 442 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 C1orf158Q8N1D5 194 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 BBS2Q9BXC9 721 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 CXorf21Q9HAI6 301 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 GPR84Q9NQS5 396 aa0.11□□□□□ -2.39
RNU6-553P-201ENST00000364047 MKRN2OSH3BPM6 223 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 I3L521 148 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 S100A7P31151 101 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 BOD1L2Q8IYS8 172 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 TMEM251Q8N6I4 163 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 UBL4BQ8N7F7 174 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 OR7G1Q8NGA0 311 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 HAVCR2Q8TDQ0 301 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 ANKRD7Q92527 254 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 SLC22A4Q9H015 551 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 MS4A6AQ9H2W1 248 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 EURLQ9NYK6 297 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 COQ4Q9Y3A0 265 aa0.1□□□□□ -2.39
RNU6-553P-201ENST00000364047 PTPRSQ13332 1948 aa0.09□□□□□ -2.39
RNU6-553P-201ENST00000364047 F8VZ95 297 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 OR2T1O43869 369 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 ORM1P02763 201 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 CLDN12P56749 244 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 SMR3AQ99954 134 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 RSL24D1Q9UHA3 163 aaKnown RBP0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 KLK9Q9UKQ9 250 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 TTC21AQ8NDW8 1320 aa0.09□□□□□ -2.4
RNU6-553P-201ENST00000364047 FUOMA2VDF0 154 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 GGT3PA6NGU5 568 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 FTCDNL1E5RQL4 147 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 SMLR1H3BR10 107 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 TOX3O15405 576 aaPredicted RBP0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 IGHV3-7P01780 117 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 DDTP30046 118 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 BRS3P32247 399 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 EIF2B2P49770 351 aaKnown RBP0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 OR4D2P58180 307 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 POLR2GP62487 172 aaKnown RBP eCLIP0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 SUPT4H1P63272 117 aaKnown RBP0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 DMTNQ08495 405 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 TNFAIP8L3Q5GJ75 292 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 AAED1Q7RTV5 226 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 LINC00471Q8N535 108 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 Q8N814 137 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 PACRGQ96M98 296 aaPredicted RBP0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 CHMP5Q9NZZ3 219 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 AK3Q9UIJ7 227 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 ANAPC10Q9UM13 185 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 ALPK2Q86TB3 2170 aa0.08□□□□□ -2.4
RNU6-553P-201ENST00000364047 DNM1P34Q6PK57 102 aa0.07□□□□□ -2.4
RNU6-553P-201ENST00000364047 WFDC11Q8NEX6 87 aa0.07□□□□□ -2.4
RNU6-553P-201ENST00000364047 AMELYQ99218 206 aa0.07□□□□□ -2.4
RNU6-553P-201ENST00000364047 DERL2Q9GZP9 239 aa0.07□□□□□ -2.4
RNU6-553P-201ENST00000364047 C10orf95Q9H7T3 257 aa0.07□□□□□ -2.4
RNU6-553P-201ENST00000364047 ZNF879B4DU55 563 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 LST1O00453 97 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 OR5F1O95221 314 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 YEATS4O95619 227 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 CXCR4P61073 352 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 RPL18Q07020 188 aaKnown RBP0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 EEF1AKMT1Q8WVE0 214 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 WDR54Q9H977 334 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 FUT9Q9Y231 359 aa0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 ANKRD17O75179 2603 aaKnown RBP0.06□□□□□ -2.4
RNU6-553P-201ENST00000364047 IGHV1-69-2A0A0G2JMI3 117 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 NOS1APO75052 506 aaPredicted RBP0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 CLPSP04118 112 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 TPM1P09493 284 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 RPS4Y1P22090 263 aaKnown RBP0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 GDF5OSQ5U4N7 250 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 FAM78BQ5VT40 261 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 AADACL4Q5VUY2 407 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 C5orf46Q6UWT4 87 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 LCN15Q6UWW0 184 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 C11orf40Q8WZ69 217 aa0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 PAQR5Q9NXK6 330 aaPredicted RBP0.05□□□□□ -2.4
RNU6-553P-201ENST00000364047 TINCRA0A1B0GVN0 87 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 FADS1O60427 444 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 HYPMO75409 117 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 KRT75O95678 551 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 C1QAP02745 245 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 KRT7P08729 469 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 ZNF80P51504 273 aaPredicted RBP0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 TNFAIP6P98066 277 aaPredicted RBP0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 C1orf194Q5T5A4 169 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 HIST2H3AQ71DI3 136 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 ZNF550Q7Z398 422 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 FAM19A5Q7Z5A7 132 aaPredicted RBP0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 JOSD2Q8TAC2 188 aa0.04□□□□□ -2.4
RNU6-553P-201ENST00000364047 ZNF418Q8TF45 676 aaPredicted RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms