RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 COL5A1-AS1Q5SY13 56 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 STPG3Q8N7X2 389 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 ZNF596Q8TC21 504 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 RNF115Q9Y4L5 304 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 SERTM2A0A1B0GWG4 89 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 LBHQ53QV2 105 aaPredicted RBP11.47□□□□□ -0.57
SGMS1-202ENST00000361781 OR5R1Q8NH85 324 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 ZCCHC14Q8WYQ9 949 aaKnown RBP11.47□□□□□ -0.57
SGMS1-202ENST00000361781 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
SGMS1-202ENST00000361781 RAB29O14966 203 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 GCHFRP30047 84 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 FOXA3P55318 350 aaPredicted RBP11.46□□□□□ -0.57
SGMS1-202ENST00000361781 IBA57Q5T440 356 aaKnown RBP11.46□□□□□ -0.57
SGMS1-202ENST00000361781 TGIF2LYQ8IUE0 185 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 ZBTB34Q8NCN2 500 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 HES4Q9HCC6 221 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 PRDM6Q9NQX0 595 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
SGMS1-202ENST00000361781 TRANK1O15050 2925 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 PCNX2A6NKB5 2137 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 A8MWP6 167 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 IGFBP2P18065 325 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 DECR2Q9NUI1 292 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 PPIAL4AQ9Y536 164 aa11.46□□□□□ -0.57
SGMS1-202ENST00000361781 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 APCSP02743 223 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 CD82P27701 267 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 LINC01551Q86U37 167 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 HAPLN4Q86UW8 402 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.58
SGMS1-202ENST00000361781 IL19Q9UHD0 177 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 WIPI2Q9Y4P8 454 aa11.46□□□□□ -0.58
SGMS1-202ENST00000361781 IGHV3-72A0A0B4J1Y9 119 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 ZNF503-AS2A6NEH8 195 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 PFN1P07737 140 aaKnown RBP11.45□□□□□ -0.58
SGMS1-202ENST00000361781 DEFB109BQ30KR1 87 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 SSC4DQ8WTU2 575 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 PILRBQ9UKJ0 227 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 M0QZK8 103 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 GGCTO75223 188 aaKnown RBP11.45□□□□□ -0.58
SGMS1-202ENST00000361781 Q0VFX4 171 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 ASPHD1Q5U4P2 390 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 TMEM105Q8N8V8 129 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 OR1B1Q8NGR6 318 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 BET1LQ9NYM9 111 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 B4E171 279 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 TSPAN7P41732 249 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 PAFAH1B2P68402 229 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 ARSJQ5FYB0 599 aaPredicted RBP11.45□□□□□ -0.58
SGMS1-202ENST00000361781 CCL17Q92583 94 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 FLYWCH2Q96CP2 140 aaKnown RBP11.45□□□□□ -0.58
SGMS1-202ENST00000361781 ZNF355PQ9NSJ1 428 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 TMEM106BQ9NUM4 274 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 OR51B2Q9Y5P1 312 aa11.45□□□□□ -0.58
SGMS1-202ENST00000361781 SPG11Q96JI7 2443 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 LOC102723996A0A087X1L8 192 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 VSTM5A8MXK1 200 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 VENTXO95231 258 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 CNIH1O95406 144 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
SGMS1-202ENST00000361781 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 GPR6P46095 362 aaPredicted RBP11.44□□□□□ -0.58
SGMS1-202ENST00000361781 MIR17HGQ75NE6 70 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 CCL13Q99616 98 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 TMEM242Q9NWH2 141 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 PLXNB1O43157 2135 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 MYOD1P15172 320 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
SGMS1-202ENST00000361781 CCL8P80075 99 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 MMDQ15546 238 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 WDR73Q6P4I2 378 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 SNHG12Q9BXW3 62 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 WASHC3Q9Y3C0 194 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 CA2P00918 260 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 ADH4P08319 380 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 CHRNB4P30926 498 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 LHX2P50458 406 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 RND2P52198 227 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 ZNF497Q6ZNH5 498 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 SARAFQ96BY9 339 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 HARBI1Q96MB7 349 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
SGMS1-202ENST00000361781 SELLP14151 372 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 RAB7AP51149 207 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 B3GALT5-AS1P59052 145 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 LCN2P80188 198 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 GBGT1Q8N5D6 347 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 NABP2Q9BQ15 211 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 DNAJC4Q9NNZ3 241 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 SEMA5BQ9P283 1151 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms