RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CXorf58Q96LI9 332 aa15.69■□□□□ 0.1
CD47-202ENST00000361309 MRPL27Q9P0M9 148 aaKnown RBP15.69■□□□□ 0.1
CD47-202ENST00000361309 UBQLN2Q9UHD9 624 aa15.69■□□□□ 0.1
CD47-202ENST00000361309 HRASP01112 189 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 HLA-GP17693 338 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 GALP22466 123 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 GPR183P32249 361 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 SLC38A6Q8IZM9 456 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 RPP25LQ8N5L8 163 aaKnown RBP15.68■□□□□ 0.1
CD47-202ENST00000361309 NUDCD2Q8WVJ2 157 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 DCSTAMPQ9H295 470 aa15.68■□□□□ 0.1
CD47-202ENST00000361309 KLK5Q9Y337 293 aaPredicted RBP15.68■□□□□ 0.1
CD47-202ENST00000361309 AQP4P55087 323 aa15.67■□□□□ 0.1
CD47-202ENST00000361309 ZNF66Q6ZN08 573 aa15.67■□□□□ 0.1
CD47-202ENST00000361309 NR2C2APQ86WQ0 139 aa15.67■□□□□ 0.1
CD47-202ENST00000361309 ZNF502Q8TBZ5 544 aa15.67■□□□□ 0.1
CD47-202ENST00000361309 UFC1Q9Y3C8 167 aa15.67■□□□□ 0.1
CD47-202ENST00000361309 TMEM235A6NFC5 223 aa15.66■□□□□ 0.1
CD47-202ENST00000361309 ELLP55199 621 aaPredicted RBP15.66■□□□□ 0.1
CD47-202ENST00000361309 PLET1Q6UQ28 207 aa15.66■□□□□ 0.1
CD47-202ENST00000361309 SPAG8Q99932 426 aaPredicted RBP15.66■□□□□ 0.1
CD47-202ENST00000361309 C5orf66Q9H5L9 145 aa15.66■□□□□ 0.1
CD47-202ENST00000361309 SMIM30A4D0T7 59 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 UBE2CO00762 179 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 TNFSF12O43508 249 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 OR2B8PP59922 312 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 TIMM50Q3ZCQ8 353 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 OR4A5Q8NH83 315 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 RNF183Q96D59 192 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 ZNF436Q9C0F3 470 aaPredicted RBP15.65■□□□□ 0.1
CD47-202ENST00000361309 HRASLSQ9HDD0 168 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 BET1LQ9NYM9 111 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 ANXA10Q9UJ72 324 aa15.65■□□□□ 0.1
CD47-202ENST00000361309 ATF4P18848 351 aaPredicted RBP15.64■□□□□ 0.09
CD47-202ENST00000361309 ZNF367Q7RTV3 350 aa15.64■□□□□ 0.09
CD47-202ENST00000361309 NDUFB11Q9NX14 153 aa15.64■□□□□ 0.09
CD47-202ENST00000361309 TRDV1A0A1B0GX56 115 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 IGLC7A0M8Q6 106 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 TSPAN4O14817 238 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 SSX5O60225 188 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 DEDDO75618 318 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 RPA2P15927 270 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 PTBP1P26599 531 aaKnown RBP eCLIP15.63■□□□□ 0.09
CD47-202ENST00000361309 GNG2P59768 71 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 TBCEQ15813 527 aaPredicted RBP15.63■□□□□ 0.09
CD47-202ENST00000361309 ODF3L2Q3SX64 289 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 C22orf42Q6IC83 251 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 SPAG16Q8N0X2 631 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 STPG3Q8N7X2 389 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 SECTM1Q8WVN6 248 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 TMEM190Q8WZ59 177 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 AIFM2Q9BRQ8 373 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 CCL28Q9NRJ3 127 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 HERC2O95714 4834 aa15.63■□□□□ 0.09
CD47-202ENST00000361309 TRAV3A0A0B4J244 114 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 KIR2DL5BA0A0G2JN68 375 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 KIR2DL5BA0A0G2JPC4 375 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 TGOLN2O43493 480 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 RPL35AP18077 110 aaKnown RBP15.62■□□□□ 0.09
CD47-202ENST00000361309 KIR2DL5AQ8N109 375 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 KIR2DL5BQ8NHK3 375 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 THYN1Q9P016 225 aa15.62■□□□□ 0.09
CD47-202ENST00000361309 OR2T8A6NH00 312 aa15.61■□□□□ 0.09
CD47-202ENST00000361309 UPK2O00526 184 aa15.61■□□□□ 0.09
CD47-202ENST00000361309 S1PR2O95136 353 aa15.61■□□□□ 0.09
CD47-202ENST00000361309 LAMTOR1Q6IAA8 161 aa15.61■□□□□ 0.09
CD47-202ENST00000361309 TMEM217Q8N7C4 229 aa15.61■□□□□ 0.09
CD47-202ENST00000361309 PHLDA1Q8WV24 401 aaPredicted RBP15.61■□□□□ 0.09
CD47-202ENST00000361309 NRG4Q8WWG1 115 aa15.61■□□□□ 0.09
CD47-202ENST00000361309 SULT1C2O00338 296 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 PTHLHP12272 177 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 FCGR2CP31995 323 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 TAS2R31P59538 309 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 MSMO1Q15800 293 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 OR10W1Q8NGF6 305 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 OR13F1Q8NGS4 319 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 VN1R17PQ8TDU5 208 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 COMMD5Q9GZQ3 224 aa15.6■□□□□ 0.09
CD47-202ENST00000361309 DAZ1Q9NQZ3 744 aaKnown RBP15.6■□□□□ 0.09
CD47-202ENST00000361309 VPS13DQ5THJ4 4388 aa15.59■□□□□ 0.09
CD47-202ENST00000361309 NOTOA8MTQ0 251 aa15.59■□□□□ 0.09
CD47-202ENST00000361309 RBFOX2O43251 390 aaKnown RBP eCLIP15.59■□□□□ 0.09
CD47-202ENST00000361309 ARPC4P59998 168 aa15.59■□□□□ 0.09
CD47-202ENST00000361309 LGALS9CQ6DKI2 356 aa15.59■□□□□ 0.09
CD47-202ENST00000361309 ZNF773Q6PK81 442 aa15.59■□□□□ 0.09
CD47-202ENST00000361309 GALNT14Q96FL9 552 aa15.59■□□□□ 0.09
CD47-202ENST00000361309 SRSF8Q9BRL6 282 aaKnown RBP15.59■□□□□ 0.09
CD47-202ENST00000361309 QTRT1Q9BXR0 403 aaKnown RBP15.59■□□□□ 0.09
CD47-202ENST00000361309 SCGNO76038 276 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 HPRT1P00492 218 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 NQO2P16083 231 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 FCGR2BP31994 310 aaPredicted RBP15.58■□□□□ 0.08
CD47-202ENST00000361309 POU2AF1Q16633 256 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 ZBTB34Q8NCN2 500 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 BEST4Q8NFU0 473 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 OR5B3Q8NH48 314 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 SLC5A7Q9GZV3 580 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 MAP6D1Q9H9H5 199 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 TMEM140Q9NV12 185 aa15.58■□□□□ 0.08
CD47-202ENST00000361309 IGHV3OR16-8A0A075B7F1 116 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms