RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TMEM177Q53S58 311 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 NHLRC3Q5JS37 347 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 WDR82Q6UXN9 313 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 WFDC3Q8IUB2 231 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 MBD3L2Q8NHZ7 208 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-202ENST00000360093 MSRB2Q9Y3D2 182 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 NOTCH4Q99466 2003 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 DENND4CQ5VZ89 1909 aa4.1□□□□□ -1.75
SCN3A-202ENST00000360093 VENTXO95231 258 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 MGPP08493 103 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 NMBP08949 121 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 TRGC1P0CF51 173 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 NAT1P18440 290 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 Q1RN00 199 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 MIC13Q5XKP0 118 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 GLRX5Q86SX6 157 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 ST6GALNAC3Q8NDV1 305 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 AUP1Q9Y679 476 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 KIAA1671Q9BY89 1806 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-202ENST00000360093 IGHG3P01860 377 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 CRYGSP22914 178 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 GAS1P54826 345 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 SNRPEP62304 92 aaKnown RBP4.09□□□□□ -1.75
SCN3A-202ENST00000360093 RUNX1Q01196 453 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 HERPUD1Q15011 391 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 ARPC1AQ92747 370 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 PHLDA3Q9Y5J5 127 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 GCGP01275 180 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 THBDP07204 575 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 PEAR1Q5VY43 1037 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-202ENST00000360093 Q6ZS92 163 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 COPS9Q8WXC6 57 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 ZNF837Q96EG3 531 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-202ENST00000360093 NPFFR1Q9GZQ6 430 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 HEATR5AQ86XA9 2040 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 SCGB1C2P0DMR2 95 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 MFAP2P55001 183 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 VAMP3Q15836 100 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 TMEM133Q9H2Q1 129 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 IFI27L2Q9H2X8 130 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 BET1LQ9NYM9 111 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 DOCK9Q9BZ29 2069 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 IGKV1D-33P01593 117 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 IGKV1-33P01594 117 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 TRGV3P03979 118 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 CD99P14209 185 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 MYOD1P15172 320 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 IER3P46695 156 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 CD300CQ08708 224 aa4.09□□□□□ -1.75
SCN3A-202ENST00000360093 ZNF418Q8TF45 676 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-202ENST00000360093 OOSP1A8MZH6 123 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 CELA3BP08861 270 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 SMIM6P0DI80 62 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF137PP52743 207 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 TCL1AP56279 114 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 GUCA2BQ16661 112 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 MORN2Q502X0 79 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 LEAP2Q969E1 77 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 SOSTQ9BQB4 213 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 C7orf69Q9H7B7 122 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 FUT9Q9Y231 359 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 DIDO1Q9BTC0 2240 aaKnown RBP4.09□□□□□ -1.76
SCN3A-202ENST00000360093 GGCTO75223 188 aaKnown RBP4.09□□□□□ -1.76
SCN3A-202ENST00000360093 LBHQ53QV2 105 aaPredicted RBP4.09□□□□□ -1.76
SCN3A-202ENST00000360093 FAM166AQ6J272 317 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 FAM53AQ6NSI3 398 aaPredicted RBP4.09□□□□□ -1.76
SCN3A-202ENST00000360093 TCF24Q7RTU0 167 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 OR4X2Q8NGF9 303 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 NPIPB3Q92617 1050 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 MARVELD3Q96A59 401 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 PEMTQ9UBM1 199 aa4.09□□□□□ -1.76
SCN3A-202ENST00000360093 YLPM1P49750 1951 aaKnown RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SIGLEC5O15389 551 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 NBR2O15453 112 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 CLPSP04118 112 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 HTN1P15515 57 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 CKS2P33552 79 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 LCN2P80188 198 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 TUSC1Q2TAM9 212 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 RPL39P5Q59GN2 51 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 MRPL54Q6P161 138 aaKnown RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF880Q6PDB4 577 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 PPP1R27Q86WC6 154 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 TEX45Q8NA69 505 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SLC25A28Q96A46 364 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 ZFP30Q9Y2G7 519 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 COL4A6Q14031 1691 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 LY6EQ16553 131 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 LINC00305Q7Z4B0 112 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 VKORC1L1Q8N0U8 176 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 RTBDNQ9BSG5 229 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SH3BGRL3Q9H299 93 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 PINLYPA6NC86 204 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 SRRM5B3KS81 715 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 H0YL77 283 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 PF4P02776 101 aa4.08□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF385CQ66K41 422 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms