RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MMP23AO75900 390 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 CDS2O95674 445 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 Q6ZRM9 215 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 COMMD1Q8N668 190 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 ORAOV1Q8WV07 137 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 NINJ1Q92982 152 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 GNG12Q9UBI6 72 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 WNK2Q9Y3S1 2297 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 NPIPB11E5RHQ5 1161 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 DEDDO75618 318 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 UCP1P25874 307 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 FHITP49789 147 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF134P52741 427 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF816Q0VGE8 651 aaPredicted RBP10.45□□□□□ -0.74
GGPS1-202ENST00000358966 LYPD2Q6UXB3 125 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 OR4X1Q8NH49 305 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 ERGIC1Q969X5 290 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 NGBQ9NPG2 151 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 VAX2Q9UIW0 290 aa10.45□□□□□ -0.74
GGPS1-202ENST00000358966 XKRY2A2RUG3 117 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 MGST3O14880 152 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 RND3P61587 244 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 WDR73Q6P4I2 378 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 TMEM56Q96MV1 263 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 RCL1Q9Y2P8 373 aaKnown RBP10.44□□□□□ -0.74
GGPS1-202ENST00000358966 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 LOC102724200A0A096LPH7 203 aaPredicted RBP10.44□□□□□ -0.74
GGPS1-202ENST00000358966 H0Y980 276 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 SERPINE2P07093 398 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 NBEAP1P0C6P0 100 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 TFF3Q07654 80 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
GGPS1-202ENST00000358966 Q6ZVH6 145 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 AQP10Q96PS8 301 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 RARRES2Q99969 163 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 RNF115Q9Y4L5 304 aa10.44□□□□□ -0.74
GGPS1-202ENST00000358966 LINC00473A8K010 186 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF705FA8MVS1 300 aaPredicted RBP10.43□□□□□ -0.74
GGPS1-202ENST00000358966 H3BP45 60 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 SSSCA1O60232 199 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF705DP0CH99 300 aaPredicted RBP10.43□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF705BP0CI00 300 aaPredicted RBP10.43□□□□□ -0.74
GGPS1-202ENST00000358966 DLX1P56177 255 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 BRWD1-AS2P59051 145 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 VAMP2P63027 116 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 NMSQ5H8A3 153 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 OR4C5Q8NGB2 326 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 A0A1W2PPR1 153 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF320A2RRD8 509 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 SPINT2O43291 252 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 PROP1O75360 226 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 CLDN14O95500 239 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 OPN1MWP04001 364 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 OPN1MW2P0DN77 364 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 OPN1MW3P0DN78 364 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 TNFRSF1AP19438 455 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 MUC15Q8N387 334 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 STPG4Q8N801 248 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 OR4D5Q8NGN0 318 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 FAM222BQ8WU58 562 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 TMEM18Q96B42 140 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 AGMATQ9BSE5 352 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 PBDC1Q9BVG4 233 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 NAGKQ9UJ70 344 aa10.43□□□□□ -0.74
GGPS1-202ENST00000358966 C17orf98A8MV24 154 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 F6UZH7 168 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 TMEM50AO95807 157 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 IGKV1-5P01602 117 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 RPL12P30050 165 aaKnown RBP10.42□□□□□ -0.74
GGPS1-202ENST00000358966 C17orf58Q2M2W7 97 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF788Q6ZQV5 615 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 TMEM106BQ9NUM4 274 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 CALYQ9NYX4 217 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 TNCP24821 2201 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 PRB1P04280 392 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 CCL3L1P16619 93 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 OR10J1P30954 320 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 APOBEC3AP31941 199 aaPredicted RBP10.42□□□□□ -0.74
GGPS1-202ENST00000358966 LOXL3P58215 753 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 MMDQ15546 238 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 FBXL19-AS1Q494R0 122 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 LINC01551Q86U37 167 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 ZNF645Q8N7E2 425 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 Q8TCH9 128 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 GPR146Q96CH1 333 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 TBX15Q96SF7 602 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 POLQO75417 2590 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 TMEM178BH3BS89 294 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 KRASP01116 189 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 OR5G3P0C626 314 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 LYL1P12980 280 aa10.42□□□□□ -0.74
GGPS1-202ENST00000358966 G6PCP35575 357 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms