RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
VCP-201ENST00000358901 IL6RP08887 468 aaPredicted RBP11.6□□□□□ -0.55
VCP-201ENST00000358901 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
VCP-201ENST00000358901 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 FGF11Q92914 225 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 TMEM189A5PLL7 270 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
VCP-201ENST00000358901 IFNL4K9M1U5 179 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 MAS1LP35410 378 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 ATP5G3P48201 142 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 WDR31Q8NA23 367 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 OR5R1Q8NH85 324 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 UBTD1Q9HAC8 227 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 RLFQ13129 1914 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 TRBV6-7A0A0A0MS04 114 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 FCGR2BP31994 310 aaPredicted RBP11.59□□□□□ -0.55
VCP-201ENST00000358901 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
VCP-201ENST00000358901 GPR6P46095 362 aaPredicted RBP11.59□□□□□ -0.55
VCP-201ENST00000358901 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 GLRX5Q86SX6 157 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 LOXL4Q96JB6 756 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 C18orf12Q96KH6 178 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 IGKV1-12A0A0C4DH73 117 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 CGAP01215 116 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 IGKV1D-12P01611 117 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 CELA3BP08861 270 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 HOXA5P20719 270 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 COTL1Q14019 142 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 ZNF146Q15072 292 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 PEAR1Q5VY43 1037 aaPredicted RBP11.59□□□□□ -0.55
VCP-201ENST00000358901 SRSF12Q8WXF0 261 aaKnown RBP11.59□□□□□ -0.55
VCP-201ENST00000358901 NEU1Q99519 415 aa11.59□□□□□ -0.55
VCP-201ENST00000358901 MGPP08493 103 aa11.58□□□□□ -0.55
VCP-201ENST00000358901 ID3Q02535 119 aa11.58□□□□□ -0.55
VCP-201ENST00000358901 IMMP2LQ96T52 175 aa11.58□□□□□ -0.55
VCP-201ENST00000358901 RABAC1Q9UI14 185 aa11.58□□□□□ -0.55
VCP-201ENST00000358901 GOLGB1Q14789 3259 aaKnown RBP11.58□□□□□ -0.56
VCP-201ENST00000358901 IGLV3-32A0A0A0MS00 114 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 LDLRAD4O15165 306 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 GLRXP35754 106 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
VCP-201ENST00000358901 TWIST1Q15672 202 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 FAM166AQ6J272 317 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 SIAH2O43255 324 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 AMY1AP04745 511 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 CD55P08174 381 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 CKS2P33552 79 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 KIR2DL2P43627 348 aaPredicted RBP11.58□□□□□ -0.56
VCP-201ENST00000358901 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
VCP-201ENST00000358901 LCN2P80188 198 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 ICAM4Q14773 271 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 REC114Q7Z4M0 266 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 OR9G1Q8NH87 305 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 FGFBP3Q8TAT2 258 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 GP6Q9HCN6 339 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 A0A087WWC5 75 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 LOC102723996A0A087X1L8 192 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 MOSP00540 346 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 CA7P43166 264 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 RNF144BQ7Z419 303 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.56
VCP-201ENST00000358901 IGFBP2P18065 325 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 CLDN18P56856 261 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 ARF6P62330 175 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 WFDC1Q9HC57 220 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 CDC42EP3Q9UKI2 254 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 ZFP30Q9Y2G7 519 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 SCO2A0A1W2PP80 73 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 GUCD1Q96NT3 240 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 LRRK1Q38SD2 2015 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 SP9P0CG40 484 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 DEPPQ9NTK1 212 aa11.57□□□□□ -0.56
VCP-201ENST00000358901 FAM216BQ8N7L0 139 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 ZIC4Q8N9L1 334 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 NDUFA2O43678 99 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 RPL23P62829 140 aaKnown RBP11.56□□□□□ -0.56
VCP-201ENST00000358901 GOLT1AQ6ZVE7 132 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 RSPO3Q9BXY4 272 aaPredicted RBP11.56□□□□□ -0.56
VCP-201ENST00000358901 DCAF16Q9NXF7 216 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 GBF1Q92538 1859 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 VWA8A3KMH1 1905 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 C5orf63A6NC05 138 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 GATA2P23769 480 aaPredicted RBP11.56□□□□□ -0.56
VCP-201ENST00000358901 RTN4RL2Q86UN3 420 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 TMEM186Q96B77 213 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 REG4Q9BYZ8 158 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms